STRINGSTRING
LOC100136559 LOC100136559 LOC106565855 LOC106565855 LOC106606044 LOC106606044 dhx58 dhx58 adar adar tomm70a tomm70a zc3h12a zc3h12a riok3 riok3 LOC106601126 LOC106601126 LOC106563358 LOC106563358 LOC106607288 LOC106607288 ENSSSAP00000030854 ENSSSAP00000030854 LOC106573969 LOC106573969 ENSSSAP00000041851 ENSSSAP00000041851 rig-I rig-I LOC106583205 LOC106583205 irf-3 irf-3 LOC106592104 LOC106592104 LOC106613337 LOC106613337 LOC106588856 LOC106588856 LOC106561533 LOC106561533 LOC106573260 LOC106573260 pou2af1 pou2af1 LOC106606442 LOC106606442 phb phb LOC106607328 LOC106607328 ENSSSAP00000073552 ENSSSAP00000073552 CLPB CLPB LOC106589020 LOC106589020 LOC106607260 LOC106607260 LOC106570529 LOC106570529 LOC106605117 LOC106605117 sting1 sting1 CCL19 CCL19 LOC106562375 LOC106562375 LOC106570861 LOC106570861 LOC106587566 LOC106587566 LOC106576680 LOC106576680 LOC106563563 LOC106563563 LOC106590364 LOC106590364 ifih1 ifih1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106565855C-C motif chemokine 19-like. (107 aa)
LOC106606044Non-syndromic hearing impairment protein 5-like. (298 aa)
dhx58Probable ATP-dependent RNA helicase DHX58. (682 aa)
adarDouble-stranded RNA-specific adenosine deaminase. (1358 aa)
tomm70aMitochondrial import receptor subunit TOM70. (614 aa)
zc3h12aRibonuclease ZC3H12A. (615 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (512 aa)
LOC106601126Apoptosis regulator BAX-like. (225 aa)
LOC106563358C-C motif chemokine 19-like. (108 aa)
LOC106607288Probable ATP-dependent RNA helicase DHX58. (682 aa)
ENSSSAP00000030854annotation not available (237 aa)
LOC106573969Double-stranded RNA-specific adenosine deaminase-like. (696 aa)
ENSSSAP00000041851annotation not available (303 aa)
rig-IRetinoic acid-inducible gene-I. (557 aa)
LOC106583205Ribonuclease ZC3H12A-like. (671 aa)
irf-3Interferon regulatory factor 3 isoform X1. (482 aa)
LOC106592104Non-syndromic hearing impairment protein 5 homolog. (279 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106588856Non-syndromic hearing impairment protein 5-like isoform X1. (492 aa)
LOC106561533Protein LSM14 homolog A-like isoform X4. (542 aa)
LOC106573260Protein LSM14 homolog A-like isoform X2. (569 aa)
pou2af1POU domain class 2-associating factor 1 isoform X1. (269 aa)
LOC106606442Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X5. (1849 aa)
phbProhibitin. (326 aa)
LOC106607328Apoptosis regulator BAX-like. (194 aa)
ENSSSAP00000073552annotation not available (175 aa)
CLPBCaseinolytic peptidase B protein homolog. (528 aa)
LOC106589020Ribonuclease ZC3H12A-like. (700 aa)
LOC106607260Prohibitin. (275 aa)
LOC106570529Non-syndromic hearing impairment protein 5-like. (494 aa)
LOC106605117Ribonuclease ZC3H12A-like. (662 aa)
sting1Stimulator of interferon genes protein. (399 aa)
CCL19C-C motif chemokine. (122 aa)
LOC106562375Protein LSM14 homolog A-like isoform X2. (452 aa)
LOC106570861C-C motif chemokine. (124 aa)
LOC106587566Protein LSM14 homolog A-like isoform X2. (448 aa)
LOC106576680Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X6. (1837 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106590364Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (505 aa)
ifih1Interferon-induced helicase C domain-containing protein 1 isoform X1. (1002 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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