STRINGSTRING
LOC106560349 LOC106560349 CDH2 CDH2 LOC106612724 LOC106612724 ENSSSAP00000012526 ENSSSAP00000012526 nptn nptn p2rx1 p2rx1 pvrl1 pvrl1 LOC106584712 LOC106584712 ENSSSAP00000055959 ENSSSAP00000055959 ENSSSAP00000068096 ENSSSAP00000068096 ENSSSAP00000068141 ENSSSAP00000068141 ENSSSAP00000068190 ENSSSAP00000068190 LOC106584192 LOC106584192 LOC106587217 LOC106587217 LOC106580720 LOC106580720 CDH2-2 CDH2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106560349Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (920 aa)
CDH2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (926 aa)
LOC106612724Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1. (758 aa)
ENSSSAP00000012526annotation not available (126 aa)
nptnNeuroplastin isoform X1. (394 aa)
p2rx1P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (440 aa)
pvrl1Nectin-1. (494 aa)
LOC106584712Neuroplastin-like isoform X1. (319 aa)
ENSSSAP00000055959Uncharacterized LOC106579049. (223 aa)
ENSSSAP00000068096P2X purinoceptor 1-like. (252 aa)
ENSSSAP00000068141annotation not available (234 aa)
ENSSSAP00000068190annotation not available (46 aa)
LOC106584192Cadherin 2, type 1, N-cadherin. (928 aa)
LOC106587217Neuroplastin-like isoform X1. (394 aa)
LOC106580720Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein. (709 aa)
CDH2-2Cadherin-2-like; Cadherins are calcium-dependent cell adhesion proteins. (948 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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