28 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dnaaf4	Dyslexia susceptibility 1 candidate gene 1 protein. (416 aa)
	hs90b	Heat shock protein HSP 90-beta isoform X1. (718 aa)
	LOC106610195	Dynein intermediate chain 3, ciliary-like. (633 aa)
	LOC106563457	Stress-induced-phosphoprotein 1-like. (560 aa)
	tctex1d2	Tctex1 domain-containing protein 2. (133 aa)
	LOC106589120	Sperm-associated antigen 1A-like. (364 aa)
	dnaaf3	Dynein assembly factor 3, axonemal. (467 aa)
	LOC106583210	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	ENSSSAP00000084719	Dynein, axonemal, intermediate chain 2b. (465 aa)
	zmynd10	Zinc finger MYND domain-containing protein 10. (465 aa)
	ENSSSAP00000095920	WD repeat domain 18. (351 aa)
	ENSSSAP00000111680	Dynein, axonemal, assembly factor 2. (519 aa)
	ENSSSAP00000119678	annotation not available (154 aa)
	LOC106587431	Dyslexia susceptibility 1 candidate gene 1 protein homolog isoform X1. (351 aa)
	LOC106603127	Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing). (563 aa)
	ENSSSAP00000070279	annotation not available (154 aa)
	wdr78	WD repeat-containing protein 78 isoform X1. (798 aa)
	wdr92	WD repeat-containing protein 92 isoform X1. (581 aa)
	LOC106594371	Sperm-associated antigen 1-like. (221 aa)
	LOC106613619	WD repeat-containing protein 18. (431 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (511 aa)
	LOC106607235	Uncharacterized protein LOC106607235. (171 aa)
	ruvb1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	ENSSSAP00000034894	Dynein, axonemal, light intermediate chain 1. (154 aa)
	hsp90ab1	Heat shock protein HSP 90-beta. (740 aa)
	dnali1	Axonemal dynein light intermediate polypeptide 1. (307 aa)
	ENSSSAP00000023819	annotation not available (118 aa)
	lrrc6	Protein tilB homolog isoform X1. (458 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000023819	LOC106589120	ENSSSAP00000023819	ENSSSAP00000077455	annotation not available	Sperm-associated antigen 1A-like.	0.420
ENSSSAP00000023819	ruvbl2	ENSSSAP00000023819	ENSSSAP00000044206	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.414
ENSSSAP00000023819	tctex1d2	ENSSSAP00000023819	ENSSSAP00000014750	annotation not available	Tctex1 domain-containing protein 2.	0.693
ENSSSAP00000034894	ENSSSAP00000084719	ENSSSAP00000034894	ENSSSAP00000084719	Dynein, axonemal, light intermediate chain 1.	Dynein, axonemal, intermediate chain 2b.	0.606
ENSSSAP00000034894	LOC106587431	ENSSSAP00000034894	ENSSSAP00000119918	Dynein, axonemal, light intermediate chain 1.	Dyslexia susceptibility 1 candidate gene 1 protein homolog isoform X1.	0.504
ENSSSAP00000034894	LOC106589120	ENSSSAP00000034894	ENSSSAP00000077455	Dynein, axonemal, light intermediate chain 1.	Sperm-associated antigen 1A-like.	0.527
ENSSSAP00000034894	LOC106594371	ENSSSAP00000034894	ENSSSAP00000056606	Dynein, axonemal, light intermediate chain 1.	Sperm-associated antigen 1-like.	0.527
ENSSSAP00000034894	LOC106610195	ENSSSAP00000034894	ENSSSAP00000007246	Dynein, axonemal, light intermediate chain 1.	Dynein intermediate chain 3, ciliary-like.	0.606
ENSSSAP00000034894	dnaaf3	ENSSSAP00000034894	ENSSSAP00000079214	Dynein, axonemal, light intermediate chain 1.	Dynein assembly factor 3, axonemal.	0.599
ENSSSAP00000034894	dnaaf4	ENSSSAP00000034894	ENSSSAP00000020861	Dynein, axonemal, light intermediate chain 1.	Dyslexia susceptibility 1 candidate gene 1 protein.	0.504
ENSSSAP00000034894	lrrc6	ENSSSAP00000034894	ENSSSAP00000014915	Dynein, axonemal, light intermediate chain 1.	Protein tilB homolog isoform X1.	0.669
ENSSSAP00000034894	ruvbl2	ENSSSAP00000034894	ENSSSAP00000044206	Dynein, axonemal, light intermediate chain 1.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.511
ENSSSAP00000034894	tctex1d2	ENSSSAP00000034894	ENSSSAP00000014750	Dynein, axonemal, light intermediate chain 1.	Tctex1 domain-containing protein 2.	0.624
ENSSSAP00000034894	wdr92	ENSSSAP00000034894	ENSSSAP00000057055	Dynein, axonemal, light intermediate chain 1.	WD repeat-containing protein 92 isoform X1.	0.581
ENSSSAP00000034894	zmynd10	ENSSSAP00000034894	ENSSSAP00000095282	Dynein, axonemal, light intermediate chain 1.	Zinc finger MYND domain-containing protein 10.	0.662
ENSSSAP00000070279	LOC106589120	ENSSSAP00000070279	ENSSSAP00000077455	annotation not available	Sperm-associated antigen 1A-like.	0.420
ENSSSAP00000070279	ruvbl2	ENSSSAP00000070279	ENSSSAP00000044206	annotation not available	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.414
ENSSSAP00000070279	tctex1d2	ENSSSAP00000070279	ENSSSAP00000014750	annotation not available	Tctex1 domain-containing protein 2.	0.693
ENSSSAP00000084719	ENSSSAP00000034894	ENSSSAP00000084719	ENSSSAP00000034894	Dynein, axonemal, intermediate chain 2b.	Dynein, axonemal, light intermediate chain 1.	0.606
ENSSSAP00000084719	ENSSSAP00000111680	ENSSSAP00000084719	ENSSSAP00000111680	Dynein, axonemal, intermediate chain 2b.	Dynein, axonemal, assembly factor 2.	0.462