31 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106593742	Phospholipase A(2). (175 aa)
	tmm27	Collectrin precursor. (220 aa)
	trh	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (258 aa)
	LOC106571889	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (256 aa)
	tnfrsf11a	Tumor necrosis factor receptor superfamily member 11A. (663 aa)
	LOC106575455	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family. (261 aa)
	LOC106579964	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (569 aa)
	LOC106582173-2	Tumor necrosis factor ligand superfamily member 11-like. (270 aa)
	LOC106585461	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (610 aa)
	ENSSSAP00000085883	annotation not available (242 aa)
	ace2	Angiotensin-converting enzyme. (742 aa)
	LOC106560235	Collectrin-like isoform X3. (220 aa)
	LOC106561421	Vesicular glutamate transporter 3. (593 aa)
	ENSSSAP00000061152	Zgc:92162. (148 aa)
	LOC106592211	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family. (261 aa)
	LOC106582173	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family. (270 aa)
	tnfsf11	Tumor necrosis factor ligand superfamily member 11 isoform X1; Belongs to the tumor necrosis factor family. (284 aa)
	ptges	Prostaglandin E synthase. (146 aa)
	LOC106590556	Uncharacterized protein LOC106590556. (682 aa)
	LOC106562718	Prostaglandin E synthase-like. (165 aa)
	CEBPB	CCAAT/enhancer-binding protein. (288 aa)
	LOC106572480	CCAAT/enhancer-binding protein. (294 aa)
	ENSSSAP00000037207	annotation not available (144 aa)
	LOC106595857	Angiotensin-converting enzyme. (477 aa)
	LOC106601151	Phospholipase A(2). (153 aa)
	ENSSSAP00000028543	annotation not available (175 aa)
	LOC106564381	85/88 kDa calcium-independent phospholipase A2-like. (534 aa)
	LOC106573301	Vesicular glutamate transporter 3-like. (585 aa)
	ENSSSAP00000009185	annotation not available (164 aa)
	ENSSSAP00000008891	annotation not available (143 aa)
	pla2g6	85/88 kDa calcium-independent phospholipase A2 isoform X1. (831 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000085883	LOC106590556	ENSSSAP00000085883	ENSSSAP00000046060	annotation not available	Uncharacterized protein LOC106590556.	0.953
ENSSSAP00000085883	tnfrsf11a	ENSSSAP00000085883	ENSSSAP00000109112	annotation not available	Tumor necrosis factor receptor superfamily member 11A.	0.953
LOC106562718	ptges	ENSSSAP00000043654	ENSSSAP00000050568	Prostaglandin E synthase-like.	Prostaglandin E synthase.	0.900
LOC106571889	trh	ENSSSAP00000110085	ENSSSAP00000113536	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.900
LOC106575455	LOC106590556	ENSSSAP00000107438	ENSSSAP00000046060	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Uncharacterized protein LOC106590556.	0.995
LOC106575455	tnfrsf11a	ENSSSAP00000107438	ENSSSAP00000109112	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Tumor necrosis factor receptor superfamily member 11A.	0.995
LOC106582173	LOC106590556	ENSSSAP00000056233	ENSSSAP00000046060	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Uncharacterized protein LOC106590556.	0.995
LOC106582173	tnfrsf11a	ENSSSAP00000056233	ENSSSAP00000109112	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Tumor necrosis factor receptor superfamily member 11A.	0.996
LOC106582173-2	LOC106590556	ENSSSAP00000089450	ENSSSAP00000046060	Tumor necrosis factor ligand superfamily member 11-like.	Uncharacterized protein LOC106590556.	0.953
LOC106582173-2	tnfrsf11a	ENSSSAP00000089450	ENSSSAP00000109112	Tumor necrosis factor ligand superfamily member 11-like.	Tumor necrosis factor receptor superfamily member 11A.	0.968
LOC106590556	ENSSSAP00000085883	ENSSSAP00000046060	ENSSSAP00000085883	Uncharacterized protein LOC106590556.	annotation not available	0.953
LOC106590556	LOC106575455	ENSSSAP00000046060	ENSSSAP00000107438	Uncharacterized protein LOC106590556.	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	0.995
LOC106590556	LOC106582173	ENSSSAP00000046060	ENSSSAP00000056233	Uncharacterized protein LOC106590556.	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	0.995
LOC106590556	LOC106582173-2	ENSSSAP00000046060	ENSSSAP00000089450	Uncharacterized protein LOC106590556.	Tumor necrosis factor ligand superfamily member 11-like.	0.953
LOC106590556	LOC106592211	ENSSSAP00000046060	ENSSSAP00000058440	Uncharacterized protein LOC106590556.	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	0.995
LOC106590556	tnfrsf11a	ENSSSAP00000046060	ENSSSAP00000109112	Uncharacterized protein LOC106590556.	Tumor necrosis factor receptor superfamily member 11A.	0.901
LOC106590556	tnfsf11	ENSSSAP00000046060	ENSSSAP00000055563	Uncharacterized protein LOC106590556.	Tumor necrosis factor ligand superfamily member 11 isoform X1; Belongs to the tumor necrosis factor family.	0.995
LOC106592211	LOC106590556	ENSSSAP00000058440	ENSSSAP00000046060	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Uncharacterized protein LOC106590556.	0.995
LOC106592211	tnfrsf11a	ENSSSAP00000058440	ENSSSAP00000109112	Tumor necrosis factor ligand superfamily member 11-like; Belongs to the tumor necrosis factor family.	Tumor necrosis factor receptor superfamily member 11A.	0.995
ptges	LOC106562718	ENSSSAP00000050568	ENSSSAP00000043654	Prostaglandin E synthase.	Prostaglandin E synthase-like.	0.900