STRINGSTRING
xpc xpc PF21A PF21A zswim7 zswim7 LOC106560826 LOC106560826 ENSSSAP00000001213 ENSSSAP00000001213 LOC106593073 LOC106593073 ku70 ku70 LOC106610674 LOC106610674 ENSSSAP00000005631 ENSSSAP00000005631 LOC106564178 LOC106564178 ercc3 ercc3 Ercc3 Ercc3 LOC106562352 LOC106562352 LOC106601363 LOC106601363 lig4 lig4 LOC106584876 LOC106584876 ENSSSAP00000030774 ENSSSAP00000030774 LOC106587113 LOC106587113 LOC106601920 LOC106601920 ENSSSAP00000034296 ENSSSAP00000034296 fanci fanci ercc4 ercc4 msh6 msh6 ascc2 ascc2 brca2 brca2 pms1 pms1 ci142 ci142 LOC106605164 LOC106605164 xrcc4 xrcc4 ENSSSAP00000059858 ENSSSAP00000059858 mlh3 mlh3 pms2 pms2 LOC106560826-2 LOC106560826-2 xpa xpa LOC106560766 LOC106560766 ENSSSAP00000079966 ENSSSAP00000079966 LOC106562517 LOC106562517 LOC106582635 LOC106582635 ercc8 ercc8 prkdc prkdc ENSSSAP00000094070 ENSSSAP00000094070 LOC106585761 LOC106585761 msh2 msh2 xpa-2 xpa-2 ercc1 ercc1 ENSSSAP00000105257 ENSSSAP00000105257 brca1 brca1 LOC106561954 LOC106561954 ENSSSAP00000115468 ENSSSAP00000115468 fancd2 fancd2 mlh1 mlh1 DPOD1 DPOD1 atm atm
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xpcDNA repair protein complementing XP-C cells. (905 aa)
PF21APHD finger protein 21A. (831 aa)
zswim7Zinc finger SWIM domain-containing protein 7. (141 aa)
LOC106560826Activating signal cointegrator 1 complex subunit 1-like isoform X1. (354 aa)
ENSSSAP00000001213annotation not available (110 aa)
LOC106593073Partner and localizer of BRCA2-like. (1294 aa)
ku70ATP-dependent DNA helicase 2 subunit 1 isoform X1. (619 aa)
LOC106610674Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (828 aa)
ENSSSAP00000005631annotation not available (94 aa)
LOC106564178Partner and localizer of BRCA2-like. (1467 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit. (759 aa)
Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit. (100 aa)
LOC106562352Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (866 aa)
LOC106601363ATPase SWSAP1-like isoform X1. (126 aa)
lig4DNA ligase. (927 aa)
LOC106584876Uncharacterized protein LOC106584876. (1240 aa)
ENSSSAP00000030774annotation not available (144 aa)
LOC106587113PHD finger protein 21A-like isoform X4. (715 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
ENSSSAP00000034296annotation not available (126 aa)
fanciFanconi anemia group I protein. (1333 aa)
ercc4DNA repair endonuclease XPF. (911 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1386 aa)
ascc2Activating signal cointegrator 1 complex subunit 2 isoform X1. (770 aa)
brca2Breast cancer type 2 susceptibility protein isoform X5. (2826 aa)
pms1PMS1 protein homolog 1 isoform X2. (914 aa)
ci142CI142 protein isoform X1. (214 aa)
LOC106605164DNA repair protein XRCC1-like. (989 aa)
xrcc4DNA repair protein XRCC4 isoform X2. (336 aa)
ENSSSAP00000059858annotation not available (300 aa)
mlh3DNA mismatch repair protein Mlh3 isoform X2. (1207 aa)
pms2Mismatch repair endonuclease PMS2 isoform X1. (911 aa)
LOC106560826-2Activating signal cointegrator 1 complex subunit 1-like isoform X2. (349 aa)
xpaDNA-repair protein complementing XP-A cells homolog. (274 aa)
LOC106560766PHD finger protein 21A-like isoform X1. (874 aa)
ENSSSAP00000079966annotation not available (1325 aa)
LOC106562517Tumor suppressor p53-binding protein 1-like isoform X3. (1923 aa)
LOC106582635DNA repair protein XRCC1-like. (633 aa)
ercc8DNA excision repair protein ERCC-8 isoform X1. (400 aa)
prkdcDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3937 aa)
ENSSSAP00000094070annotation not available (89 aa)
LOC106585761DNA repair protein XRCC4-like isoform X1. (317 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (928 aa)
xpa-2DNA repair protein complementing XP-A cells. (278 aa)
ercc1DNA excision repair protein ERCC-1. (383 aa)
ENSSSAP00000105257Serine-protein kinase ATM-like. (111 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
LOC106561954PHD finger protein 21A-like isoform X1. (720 aa)
ENSSSAP00000115468X-ray repair complementing defective repair in Chinese hamster cells 6. (364 aa)
fancd2Fanconi anemia group D2 protein. (1490 aa)
mlh1DNA mismatch repair protein Mlh1. (729 aa)
DPOD1DNA polymerase. (899 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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