21 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000103316	annotation not available (69 aa)
	LOC106585921	Nipped-B protein. (1257 aa)
	LOC106588509	Double-strand-break repair protein rad21 homolog. (641 aa)
	ENSSSAP00000005368	annotation not available (283 aa)
	ENSSSAP00000005784	Double-strand-break repair protein rad21 homolog. (515 aa)
	ENSSSAP00000005859	annotation not available (69 aa)
	LOC106607888	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
	LOC106601412	ATP-dependent DNA helicase Q5-like. (798 aa)
	LOC106563887	Nipped-B protein. (2706 aa)
	LOC106606972	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (443 aa)
	ENSSSAP00000021767	annotation not available (69 aa)
	ENSSSAP00000021974	annotation not available (69 aa)
	ENSSSAP00000002832	annotation not available (282 aa)
	ENSSSAP00000023889	annotation not available (69 aa)
	LOC106573320	Double-strand-break repair protein rad21 homolog. (128 aa)
	rad51	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
	fancb	Fanconi anemia group B protein isoform X3. (767 aa)
	LOC106605164	DNA repair protein XRCC1-like. (989 aa)
	LOC106567227	Double-strand-break repair protein rad21 homolog. (542 aa)
	LOC106582635	DNA repair protein XRCC1-like. (633 aa)
	LOC106572450	Double-strand-break repair protein rad21 homolog isoform X1. (556 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000002832	LOC106607888	ENSSSAP00000002832	ENSSSAP00000005863	annotation not available	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.803
ENSSSAP00000002832	rad51	ENSSSAP00000002832	ENSSSAP00000042073	annotation not available	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.803
ENSSSAP00000005368	LOC106607888	ENSSSAP00000005368	ENSSSAP00000005863	annotation not available	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.803
ENSSSAP00000005368	rad51	ENSSSAP00000005368	ENSSSAP00000042073	annotation not available	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.803
ENSSSAP00000005784	LOC106563887	ENSSSAP00000005784	ENSSSAP00000000757	Double-strand-break repair protein rad21 homolog.	Nipped-B protein.	0.889
ENSSSAP00000005784	LOC106585921	ENSSSAP00000005784	ENSSSAP00000103829	Double-strand-break repair protein rad21 homolog.	Nipped-B protein.	0.889
ENSSSAP00000005859	LOC106563887	ENSSSAP00000005859	ENSSSAP00000000757	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000005859	LOC106585921	ENSSSAP00000005859	ENSSSAP00000103829	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000021767	LOC106563887	ENSSSAP00000021767	ENSSSAP00000000757	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000021767	LOC106585921	ENSSSAP00000021767	ENSSSAP00000103829	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000021974	LOC106563887	ENSSSAP00000021974	ENSSSAP00000000757	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000021974	LOC106585921	ENSSSAP00000021974	ENSSSAP00000103829	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000023889	LOC106563887	ENSSSAP00000023889	ENSSSAP00000000757	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000023889	LOC106585921	ENSSSAP00000023889	ENSSSAP00000103829	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000103316	LOC106563887	ENSSSAP00000103316	ENSSSAP00000000757	annotation not available	Nipped-B protein.	0.889
ENSSSAP00000103316	LOC106585921	ENSSSAP00000103316	ENSSSAP00000103829	annotation not available	Nipped-B protein.	0.889
LOC106563887	ENSSSAP00000005784	ENSSSAP00000000757	ENSSSAP00000005784	Nipped-B protein.	Double-strand-break repair protein rad21 homolog.	0.889
LOC106563887	ENSSSAP00000005859	ENSSSAP00000000757	ENSSSAP00000005859	Nipped-B protein.	annotation not available	0.889
LOC106563887	ENSSSAP00000021767	ENSSSAP00000000757	ENSSSAP00000021767	Nipped-B protein.	annotation not available	0.889
LOC106563887	ENSSSAP00000021974	ENSSSAP00000000757	ENSSSAP00000021974	Nipped-B protein.	annotation not available	0.889