20 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106581757	Mitogen-activated protein kinase kinase kinase MLT-like isoform X1. (855 aa)
	LOC106568504	Cell cycle and apoptosis regulator protein 2-like. (797 aa)
	LOC106570322	Serine/threonine-protein phosphatase 1 regulatory subunit 10-like isoform X2. (842 aa)
	LOC106588707	Serine/threonine-protein phosphatase 1 regulatory subunit 10-like isoform X2. (842 aa)
	topk	Lymphokine-activated killer T-cell-originated protein kinase homolog. (370 aa)
	LOC106562441	WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (417 aa)
	LOC106607811	Lymphokine-activated killer T-cell-originated protein kinase homolog. (357 aa)
	fem1b	Protein fem-1 homolog B. (641 aa)
	FBX4	F-box only protein 4. (408 aa)
	ENSSSAP00000074925	annotation not available (436 aa)
	LOC106580118	Serine/threonine-protein kinase Chk2-like isoform X1. (508 aa)
	LOC106569323	THO complex subunit 1-like isoform X1. (656 aa)
	ENSSSAP00000068563	annotation not available (782 aa)
	LOC106585648	Serine/threonine-protein kinase Chk2-like isoform X2. (546 aa)
	LOC106594158	WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (360 aa)
	tti2	TELO2-interacting protein 2 isoform X1. (518 aa)
	LOC106573030	Protein fem-1 homolog B-like. (624 aa)
	ENSSSAP00000026091	annotation not available (509 aa)
	LOC106569504	Mitogen-activated protein kinase kinase kinase MLT. (483 aa)
	LOC106600433	THO complex subunit 1-like. (679 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106568504	LOC106580118	ENSSSAP00000108226	ENSSSAP00000073753	Cell cycle and apoptosis regulator protein 2-like.	Serine/threonine-protein kinase Chk2-like isoform X1.	0.479
LOC106568504	LOC106585648	ENSSSAP00000108226	ENSSSAP00000055524	Cell cycle and apoptosis regulator protein 2-like.	Serine/threonine-protein kinase Chk2-like isoform X2.	0.479
LOC106569323	LOC106600433	ENSSSAP00000070024	ENSSSAP00000000485	THO complex subunit 1-like isoform X1.	THO complex subunit 1-like.	0.900
LOC106569504	LOC106581757	ENSSSAP00000008945	ENSSSAP00000091974	Mitogen-activated protein kinase kinase kinase MLT.	Mitogen-activated protein kinase kinase kinase MLT-like isoform X1.	0.915
LOC106580118	LOC106568504	ENSSSAP00000073753	ENSSSAP00000108226	Serine/threonine-protein kinase Chk2-like isoform X1.	Cell cycle and apoptosis regulator protein 2-like.	0.479
LOC106580118	LOC106585648	ENSSSAP00000073753	ENSSSAP00000055524	Serine/threonine-protein kinase Chk2-like isoform X1.	Serine/threonine-protein kinase Chk2-like isoform X2.	0.900
LOC106581757	LOC106569504	ENSSSAP00000091974	ENSSSAP00000008945	Mitogen-activated protein kinase kinase kinase MLT-like isoform X1.	Mitogen-activated protein kinase kinase kinase MLT.	0.915
LOC106585648	LOC106568504	ENSSSAP00000055524	ENSSSAP00000108226	Serine/threonine-protein kinase Chk2-like isoform X2.	Cell cycle and apoptosis regulator protein 2-like.	0.479
LOC106585648	LOC106580118	ENSSSAP00000055524	ENSSSAP00000073753	Serine/threonine-protein kinase Chk2-like isoform X2.	Serine/threonine-protein kinase Chk2-like isoform X1.	0.900
LOC106600433	LOC106569323	ENSSSAP00000000485	ENSSSAP00000070024	THO complex subunit 1-like.	THO complex subunit 1-like isoform X1.	0.900