62 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ptgdr2	Prostaglandin D2 receptor 2; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	LOC106577689	Prostaglandin D2 receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (454 aa)
	LOC106561926	DNA damage-binding protein 1-like isoform X1. (1139 aa)
	hormad1	HORMA domain-containing protein 1 isoform X2. (382 aa)
	LOC106586422	ELL-associated factor 2-like isoform X1. (285 aa)
	ENSSSAP00000093039	F-box protein 5. (324 aa)
	ENSSSAP00000095853	annotation not available (287 aa)
	mos	Proto-oncogene serine/threonine-protein kinase mos; Belongs to the protein kinase superfamily. (335 aa)
	LOC106571236	Uncharacterized protein LOC106571236 isoform X1. (955 aa)
	ddb1	Salmo salar DNA damage-binding protein 1 (ddb1), mRNA. (1244 aa)
	LOC106577103	F-box only protein 5-like. (393 aa)
	LOC106565677	Methylosome protein 50-like. (338 aa)
	LOC106608698	Uncharacterized protein LOC106608698. (649 aa)
	LOC106568862	Zona pellucida sperm-binding protein 4-like. (447 aa)
	LOC106600553	Proteoglycan 4-like. (870 aa)
	prdx4	Peroxiredoxin-4. (262 aa)
	LOC106599556	Zona pellucida sperm-binding protein 4-like. (432 aa)
	ENSSSAP00000007804	annotation not available (347 aa)
	LOC106610527	Prostaglandin D2 receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (390 aa)
	ENSSSAP00000011703	annotation not available (116 aa)
	LOC106605052	Dual specificity protein kinase Ttk-like isoform X1. (1008 aa)
	LOC106605330	HORMA domain-containing protein 1-like isoform X2. (382 aa)
	ENSSSAP00000021824	annotation not available (473 aa)
	LOC106595954-2	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family. (416 aa)
	LOC106598538	Zona pellucida sperm-binding protein 4-like. (761 aa)
	LOC106597702	Uncharacterized protein LOC106597702 isoform X2. (579 aa)
	ENSSSAP00000026189	annotation not available (416 aa)
	fbxo43	F-box only protein 43. (679 aa)
	ENSSSAP00000029131	Zinc finger protein, FOG family member 2a. (988 aa)
	LOC106566776	Hyaluronidase. (437 aa)
	LOC106571709	Uncharacterized protein LOC106571709 isoform X1. (1929 aa)
	LOC106601100	G-protein coupled estrogen receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (300 aa)
	mep50	Methylosome protein 50 isoform X1. (338 aa)
	GPR149	Probable G-protein coupled receptor 149. (750 aa)
	LOC106595954	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family. (432 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	nkx3-1	Homeobox protein koza. (202 aa)
	LOC106602857	Uncharacterized protein LOC106602857 isoform X2. (781 aa)
	LOC106577652	Uncharacterized protein LOC106577652 isoform X1. (760 aa)
	LOC106588910	Nanos homolog 2-like; Belongs to the nanos family. (182 aa)
	LOC106583830	Dual specificity protein kinase Ttk-like isoform X2. (1008 aa)
	LOC106573457	Protein FAM107B-like isoform X1. (314 aa)
	LOC100136517	Insulin-like growth factor I isoform X1. (198 aa)
	LOC106588221	Zinc finger protein ZFPM2-like isoform X1. (1084 aa)
	LOC106605482	Zinc finger protein ZFPM2-like. (1039 aa)
	LOC106607359	G-protein coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (304 aa)
	LOC106607570	Zona pellucida sperm-binding protein 4-like. (859 aa)
	nkx31	Homeobox protein Nkx-3.1. (202 aa)
	RAD1	Cell cycle checkpoint protein RAD1. (279 aa)
	ENSSSAP00000064394	annotation not available (110 aa)
	GPR149-2	G protein-coupled receptor 149. (543 aa)
	amh	Anti-mullerian hormone precursor. (600 aa)
	STK11	Serine/threonine-protein kinase STK11-like. (330 aa)
	ENSSSAP00000073229	annotation not available (145 aa)
	STK11-2	Serine/threonine-protein kinase STK11-like isoform X1; Belongs to the protein kinase superfamily. (427 aa)
	LOC106561200	Protein FAM107B-like isoform X1. (165 aa)
	LOC106563587	Peroxiredoxin-4-like. (262 aa)
	LOC106582356	ELL-associated factor 2-like. (288 aa)
	ENSSSAP00000117674	annotation not available (417 aa)
	ENSSSAP00000117876	Uncharacterized LOC106608796. (550 aa)
	LOC106569551	Zona pellucida sperm-binding protein 4-like isoform X1. (750 aa)
	LOC106599971	Serine/threonine-protein kinase STK11-like; Belongs to the protein kinase superfamily. (433 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000011703	LOC100136517	ENSSSAP00000011703	ENSSSAP00000052543	annotation not available	Insulin-like growth factor I isoform X1.	0.459
ENSSSAP00000011703	LOC106609475	ENSSSAP00000011703	ENSSSAP00000040530	annotation not available	Insulin-like growth factor I isoform X1.	0.459
ENSSSAP00000026189	LOC106583830	ENSSSAP00000026189	ENSSSAP00000049607	annotation not available	Dual specificity protein kinase Ttk-like isoform X2.	0.562
ENSSSAP00000026189	LOC106605052	ENSSSAP00000026189	ENSSSAP00000020412	annotation not available	Dual specificity protein kinase Ttk-like isoform X1.	0.562
ENSSSAP00000026189	LOC106605330	ENSSSAP00000026189	ENSSSAP00000021444	annotation not available	HORMA domain-containing protein 1-like isoform X2.	0.601
ENSSSAP00000026189	RAD1	ENSSSAP00000026189	ENSSSAP00000064309	annotation not available	Cell cycle checkpoint protein RAD1.	0.579
ENSSSAP00000026189	hormad1	ENSSSAP00000026189	ENSSSAP00000090472	annotation not available	HORMA domain-containing protein 1 isoform X2.	0.601
ENSSSAP00000064394	amh	ENSSSAP00000064394	ENSSSAP00000068623	annotation not available	Anti-mullerian hormone precursor.	0.403
ENSSSAP00000093039	LOC106583830	ENSSSAP00000093039	ENSSSAP00000049607	F-box protein 5.	Dual specificity protein kinase Ttk-like isoform X2.	0.469
ENSSSAP00000093039	LOC106605052	ENSSSAP00000093039	ENSSSAP00000020412	F-box protein 5.	Dual specificity protein kinase Ttk-like isoform X1.	0.469
LOC100136517	ENSSSAP00000011703	ENSSSAP00000052543	ENSSSAP00000011703	Insulin-like growth factor I isoform X1.	annotation not available	0.459
LOC100136517	amh	ENSSSAP00000052543	ENSSSAP00000068623	Insulin-like growth factor I isoform X1.	Anti-mullerian hormone precursor.	0.437
LOC106583830	ENSSSAP00000026189	ENSSSAP00000049607	ENSSSAP00000026189	Dual specificity protein kinase Ttk-like isoform X2.	annotation not available	0.562
LOC106583830	ENSSSAP00000093039	ENSSSAP00000049607	ENSSSAP00000093039	Dual specificity protein kinase Ttk-like isoform X2.	F-box protein 5.	0.469
LOC106583830	LOC106595954	ENSSSAP00000049607	ENSSSAP00000039476	Dual specificity protein kinase Ttk-like isoform X2.	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family.	0.562
LOC106583830	LOC106595954-2	ENSSSAP00000049607	ENSSSAP00000021940	Dual specificity protein kinase Ttk-like isoform X2.	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family.	0.562
LOC106583830	LOC106605052	ENSSSAP00000049607	ENSSSAP00000020412	Dual specificity protein kinase Ttk-like isoform X2.	Dual specificity protein kinase Ttk-like isoform X1.	0.900
LOC106588910	amh	ENSSSAP00000046275	ENSSSAP00000068623	Nanos homolog 2-like; Belongs to the nanos family.	Anti-mullerian hormone precursor.	0.403
LOC106595954	LOC106583830	ENSSSAP00000039476	ENSSSAP00000049607	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family.	Dual specificity protein kinase Ttk-like isoform X2.	0.562
LOC106595954	LOC106605052	ENSSSAP00000039476	ENSSSAP00000020412	Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family.	Dual specificity protein kinase Ttk-like isoform X1.	0.562