STRINGSTRING
LOC106568989 LOC106568989 tf2b tf2b LOC106563563 LOC106563563 rb1 rb1 LOC106589530 LOC106589530 LOC106609475 LOC106609475 xpp3 xpp3 LOC100136517 LOC100136517 LOC106613337 LOC106613337 LOC106607167 LOC106607167 LOC100136559 LOC100136559 LOC106608924 LOC106608924
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106568989Transcription initiation factor IIB-like. (318 aa)
tf2bTranscription initiation factor IIB. (321 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
rb1Retinoblastoma-associated protein. (910 aa)
LOC106589530CREB-binding protein-like isoform X4. (2921 aa)
LOC106609475Insulin-like growth factor I isoform X1. (211 aa)
xpp3Histone acetyltransferase p300-like isoform X8. (2344 aa)
LOC100136517Insulin-like growth factor I isoform X1. (198 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
LOC106607167Histone acetyltransferase p300-like isoform X9. (2695 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106608924Histone acetyltransferase p300-like isoform X2. (2752 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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