STRINGSTRING
LOC106560245 LOC106560245 irf1-2 irf1-2 LOC106560844 LOC106560844 LOC106584225 LOC106584225 crtam crtam LOC106573726 LOC106573726 LOC106567642 LOC106567642 vsir vsir irf1 irf1 LOC106599427 LOC106599427
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106560245E3 ubiquitin-protein ligase SH3RF1-like isoform X1. (877 aa)
irf1-2Interferon regulatory factor. (332 aa)
LOC106560844Core-binding factor subunit beta-like. (197 aa)
LOC106584225E3 ubiquitin-protein ligase SH3RF1-like. (880 aa)
crtamCytotoxic and regulatory T-cell molecule. (457 aa)
LOC106573726Core-binding factor subunit beta isoform X1. (198 aa)
LOC106567642Cytotoxic and regulatory T-cell molecule-like isoform X2. (426 aa)
vsirPlatelet receptor Gi24 isoform X2. (301 aa)
irf1Interferon regulatory factor. (334 aa)
LOC106599427Suppressor of cytokine signaling 1-like. (200 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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