25 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	LOC106589972	Transforming acidic coiled-coil-containing protein 2-like isoform X1. (1270 aa)
	haus2	HAUS augmin-like complex subunit 2 isoform X1. (203 aa)
	LOC106580473	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (312 aa)
	polb	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (344 aa)
	LOC106571586	Heterogeneous nuclear ribonucleoprotein U-like. (836 aa)
	LOC106608119	Heterogeneous nuclear ribonucleoprotein U-like. (918 aa)
	LOC106582088	Poly [ADP-ribose] polymerase. (2062 aa)
	klhl22	Kelch-like protein 22. (621 aa)
	LOC106572566	Kelch-like protein 21. (621 aa)
	LOC106576805	Tubulin--tyrosine ligase-like. (412 aa)
	hnrnpu	Heterogeneous nuclear ribonucleoprotein U isoform X1. (771 aa)
	ska2-2	Spindle and kinetochore associated complex subunit 2. (170 aa)
	klhl21	Kelch-like protein 21. (628 aa)
	LOC106581281	Uncharacterized protein LOC106581281 isoform X2. (1863 aa)
	KIF18A-2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (918 aa)
	LOC106577582	HAUS augmin-like complex subunit 6 isoform X1. (841 aa)
	ENSSSAP00000094254	annotation not available (186 aa)
	kntc1	Kinetochore-associated protein 1. (2205 aa)
	cenpe	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2558 aa)
	ska2	Spindle and kinetochore-associated protein 2; Component of the SKA1 complex, a microtubule-binding subcomplex of the outer kinetochore that is essential for proper chromosome segregation. Required for timely anaphase onset during mitosis, when chromosomes undergo bipolar attachment on spindle microtubules leading to silencing of the spindle checkpoint. The SKA1 complex is a direct component of the kinetochore-microtubule interface and directly associates with microtubules as oligomeric assemblies. The complex facilitates the processive movement of microspheres along a microtubule in a [...] (228 aa)
	ENSSSAP00000026297	annotation not available (440 aa)
	LOC106604770	Tubulin--tyrosine ligase-like isoform X1. (411 aa)
	KIF18A	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (917 aa)
	fa29a	FAM29A. (835 aa)
	LOC106610728	Centriole, cilia and spindle-associated protein-like isoform X2. (235 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000026297	LOC106572566	ENSSSAP00000026297	ENSSSAP00000107898	annotation not available	Kelch-like protein 21.	0.589
ENSSSAP00000026297	klhl21	ENSSSAP00000026297	ENSSSAP00000075003	annotation not available	Kelch-like protein 21.	0.589
KIF18A	cenpe	ENSSSAP00000021990	ENSSSAP00000097445	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
KIF18A	kntc1	ENSSSAP00000021990	ENSSSAP00000103654	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinetochore-associated protein 1.	0.521
KIF18A-2	cenpe	ENSSSAP00000079796	ENSSSAP00000097445	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
KIF18A-2	kntc1	ENSSSAP00000079796	ENSSSAP00000103654	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinetochore-associated protein 1.	0.521
LOC106572566	ENSSSAP00000026297	ENSSSAP00000107898	ENSSSAP00000026297	Kelch-like protein 21.	annotation not available	0.589
LOC106572566	klhl22	ENSSSAP00000107898	ENSSSAP00000110640	Kelch-like protein 21.	Kelch-like protein 22.	0.589
LOC106577582	LOC106589972	ENSSSAP00000032918	ENSSSAP00000118127	HAUS augmin-like complex subunit 6 isoform X1.	Transforming acidic coiled-coil-containing protein 2-like isoform X1.	0.440
LOC106577582	cenpe	ENSSSAP00000032918	ENSSSAP00000097445	HAUS augmin-like complex subunit 6 isoform X1.	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.463
LOC106577582	haus2	ENSSSAP00000032918	ENSSSAP00000040319	HAUS augmin-like complex subunit 6 isoform X1.	HAUS augmin-like complex subunit 2 isoform X1.	0.984
LOC106580473	LOC106582088	ENSSSAP00000043267	ENSSSAP00000054707	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	Poly [ADP-ribose] polymerase.	0.553
LOC106582088	LOC106580473	ENSSSAP00000054707	ENSSSAP00000043267	Poly [ADP-ribose] polymerase.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.553
LOC106582088	polb	ENSSSAP00000054707	ENSSSAP00000043656	Poly [ADP-ribose] polymerase.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.553
LOC106589972	LOC106577582	ENSSSAP00000118127	ENSSSAP00000032918	Transforming acidic coiled-coil-containing protein 2-like isoform X1.	HAUS augmin-like complex subunit 6 isoform X1.	0.440
LOC106589972	fa29a	ENSSSAP00000118127	ENSSSAP00000011905	Transforming acidic coiled-coil-containing protein 2-like isoform X1.	FAM29A.	0.440
cenpe	KIF18A	ENSSSAP00000097445	ENSSSAP00000021990	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
cenpe	KIF18A-2	ENSSSAP00000097445	ENSSSAP00000079796	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
cenpe	LOC106577582	ENSSSAP00000097445	ENSSSAP00000032918	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	HAUS augmin-like complex subunit 6 isoform X1.	0.463
cenpe	fa29a	ENSSSAP00000097445	ENSSSAP00000011905	Centromere-associated protein E isoform X3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	FAM29A.	0.463