STRINGSTRING
LOC106575915 LOC106575915 LOC106604632 LOC106604632 LOC106563938 LOC106563938 ENSSSAP00000014056 ENSSSAP00000014056 LOC106576591-2 LOC106576591-2 LOC106576591 LOC106576591 LOC106579040 LOC106579040 LOC106573693 LOC106573693 LOC106587357 LOC106587357 wt1 wt1 LOC106564452 LOC106564452 LOC106608730 LOC106608730 LOC106563325 LOC106563325 LOC106569139 LOC106569139 ccd16 ccd16 LOC106583276 LOC106583276 ENSSSAP00000119029 ENSSSAP00000119029 LOC106583084 LOC106583084 LOC106580519 LOC106580519 LOC106586509 LOC106586509 LOC106565348 LOC106565348 ENSSSAP00000115683 ENSSSAP00000115683 ENSSSAP00000115674 ENSSSAP00000115674 LOC106583750 LOC106583750 DGKQ DGKQ NR3C1-2 NR3C1-2 LOC106565658 LOC106565658 LOC106575454 LOC106575454 LOC106564644 LOC106564644 LOC106566793 LOC106566793 SRPK3 SRPK3 RBM15 RBM15 LOC106587580 LOC106587580 LOC106573267 LOC106573267 sfrs6 sfrs6 nsrp1 nsrp1 LOC106594281 LOC106594281 nrde2 nrde2 LOC106608592 LOC106608592 pnisr pnisr LOC106603179 LOC106603179 LOC106603296 LOC106603296 LOC106604224 LOC106604224 RSRC1 RSRC1 LOC106601201 LOC106601201 LOC106607092 LOC106607092 ENSSSAP00000064907 ENSSSAP00000064907 LOC106602985 LOC106602985 LOC106611739 LOC106611739 LOC106592210 LOC106592210 LOC106577683 LOC106577683 ENSSSAP00000057906 ENSSSAP00000057906 LOC106577684 LOC106577684 LOC106572599 LOC106572599 hspb3 hspb3 LOC106582227 LOC106582227 LOC106583545 LOC106583545 LOC106566210 LOC106566210 fto fto ENSSSAP00000053509 ENSSSAP00000053509 LOC106597078 LOC106597078 apex1 apex1 ENSSSAP00000052075 ENSSSAP00000052075 RBM4B RBM4B fytd1 fytd1 LOC106611464 LOC106611464 LOC106606494 LOC106606494 LOC106611639 LOC106611639 LOC106566414 LOC106566414 ythdc1 ythdc1 LOC106604944 LOC106604944 LOC106611977 LOC106611977 LOC106612789 LOC106612789 DDX5 DDX5 sfrs1 sfrs1 ENSSSAP00000044310 ENSSSAP00000044310 LOC106560984 LOC106560984 ddx39 ddx39 LOC100196682 LOC100196682 LOC106599769 LOC106599769 ZNF830 ZNF830 LOC106608217 LOC106608217 LOC106608275 LOC106608275 LOC106570648 LOC106570648 LOC106581340 LOC106581340 LOC106574731 LOC106574731 LOC106601225 LOC106601225 srsf2 srsf2 LOC106601397 LOC106601397 rbm25 rbm25 SRSF10-2 SRSF10-2 ENSSSAP00000035404 ENSSSAP00000035404 NR3C1 NR3C1 dusp11 dusp11 habp4-2 habp4-2 wtap wtap LOC106585128 LOC106585128 LOC106582688 LOC106582688 LOC106611619 LOC106611619 fa76b fa76b rad54l2 rad54l2 basp1 basp1 LOC106590410 LOC106590410 wt1-2 wt1-2 LOC106571981 LOC106571981 ENSSSAP00000030197 ENSSSAP00000030197 LOC106567088 LOC106567088 LOC100380702 LOC100380702 LOC106573861 LOC106573861 LOC106589849 LOC106589849 scnm1 scnm1 LOC106587831 LOC106587831 ENSSSAP00000028300 ENSSSAP00000028300 ENSSSAP00000026407 ENSSSAP00000026407 SRSF10 SRSF10 ENSSSAP00000023196 ENSSSAP00000023196 LOC106570375 LOC106570375 LOC106566080 LOC106566080 LOC106608158 LOC106608158 ENSSSAP00000017280 ENSSSAP00000017280 LOC106604736 LOC106604736 LOC106567767 LOC106567767 srek1 srek1 LOC106568568 LOC106568568 uap56 uap56 LOC106568668 LOC106568668 ENSSSAP00000090487 ENSSSAP00000090487 ENSSSAP00000090480 ENSSSAP00000090480 habp4 habp4 ENSSSAP00000088449 ENSSSAP00000088449 LOC106611706 LOC106611706 LOC106607118 LOC106607118 LOC106613665 LOC106613665 LOC106571090 LOC106571090 LOC106572836 LOC106572836 LOC106571670 LOC106571670 LOC106572303 LOC106572303 LOC106568741 LOC106568741 dhx36 dhx36 ddx39b ddx39b LOC106612293 LOC106612293 LOC106584003 LOC106584003 tut1 tut1 LOC106583438 LOC106583438 fusip fusip INPPL1 INPPL1 LOC106584470 LOC106584470
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106575915Zinc finger CCCH domain-containing protein 13-like isoform X3. (1644 aa)
LOC106604632WD40 repeat-containing protein SMU1. (555 aa)
LOC106563938Serine/arginine-rich splicing factor 1B-like. (267 aa)
ENSSSAP00000014056annotation not available (335 aa)
LOC106576591-2DNA-(apurinic or apyrimidinic site) lyase-like. (342 aa)
LOC106576591DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (342 aa)
LOC106579040LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog. (678 aa)
LOC106573693Zinc finger CCCH domain-containing protein 18-like isoform X2. (1095 aa)
LOC106587357ATP-dependent RNA helicase DDX39A. (427 aa)
wt1Wilms tumor protein isoform X1. (486 aa)
LOC106564452Zinc finger protein GLIS2-like isoform X1. (522 aa)
LOC106608730RNA-binding protein 4.1-like. (383 aa)
LOC106563325Intracellular hyaluronan-binding protein 4-like isoform X1. (370 aa)
LOC106569139Serine/arginine-rich splicing factor 11-like isoform X3. (469 aa)
ccd16Coiled-coil domain-containing protein 16. (352 aa)
LOC106583276SAP domain-containing ribonucleoprotein-like isoform X1. (258 aa)
ENSSSAP00000119029annotation not available (132 aa)
LOC106583084Serine/arginine-rich splicing factor 3 isoform X1. (170 aa)
LOC106580519C8orf4 homolog. (101 aa)
LOC106586509A-kinase anchor protein 17A-like. (712 aa)
LOC106565348Serine/arginine-rich splicing factor 3-like. (172 aa)
ENSSSAP00000115683annotation not available (150 aa)
ENSSSAP00000115674annotation not available (127 aa)
LOC106583750Putative RNA-binding protein 15B. (851 aa)
DGKQDiacylglycerol kinase. (901 aa)
NR3C1-2Glucocorticoid receptor isoform X2. (771 aa)
LOC106565658Serine/arginine-rich splicing factor 3. (272 aa)
LOC106575454WW domain-binding protein 4-like. (406 aa)
LOC106564644ATP-dependent RNA helicase DDX39A. (427 aa)
LOC106566793Helicase ARIP4-like isoform X2. (1412 aa)
SRPK3Serine/threonine-protein kinase SRPK3. (796 aa)
RBM15Putative RNA-binding protein 15. (836 aa)
LOC106587580Alpha-ketoglutarate-dependent dioxygenase FTO-like. (462 aa)
LOC106573267Zinc finger CCCH domain-containing protein 13-like. (241 aa)
sfrs6Splicing factor, arginine/serine-rich 6 isoform X1. (334 aa)
nsrp1Nuclear speckle splicing regulatory protein 1 isoform X1. (493 aa)
LOC106594281RNA demethylase ALKBH5-like. (364 aa)
nrde2Protein NRDE2 homolog isoform X1. (1194 aa)
LOC106608592RNA-binding protein 4.1-like isoform X1. (418 aa)
pnisrArginine/serine-rich protein PNISR isoform X1. (889 aa)
LOC106603179Splicing regulator RBM11-like. (108 aa)
LOC106603296non-POU domain-containing octamer-binding protein-like isoform X1. (447 aa)
LOC106604224Glucocorticoid receptor-like isoform X1. (665 aa)
RSRC1Arginine/serine-rich coiled-coil protein 1. (257 aa)
LOC106601201WW domain-binding protein 11-like. (195 aa)
LOC106607092WW domain-binding protein 11-like. (336 aa)
ENSSSAP00000064907alkB homolog 5, RNA demethylase. (357 aa)
LOC106602985Serine/arginine-rich splicing factor 5-like. (315 aa)
LOC106611739Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like isoform X1. (1257 aa)
LOC106592210WW domain-binding protein 4-like. (404 aa)
LOC106577683RNA-binding protein 4B-like isoform X5. (332 aa)
ENSSSAP00000057906annotation not available (146 aa)
LOC106577684RNA-binding protein 4B-like. (387 aa)
LOC106572599SAP domain-containing ribonucleoprotein-like isoform X2. (214 aa)
hspb3Heat shock protein beta-3; Belongs to the small heat shock protein (HSP20) family. (164 aa)
LOC106582227A-kinase anchor protein 17A-like. (698 aa)
LOC106583545Serine/arginine-rich splicing factor 3-like. (226 aa)
LOC106566210Putative RNA-binding protein 15B. (845 aa)
ftoAlpha-ketoglutarate-dependent dioxygenase FTO isoform X1. (615 aa)
ENSSSAP00000053509annotation not available (228 aa)
LOC106597078Uncharacterized protein LOC106597078. (948 aa)
apex1Salmo salar APEX nuclease (multifunctional DNA repair enzyme) 1 (apex1), mRNA. (344 aa)
ENSSSAP00000052075annotation not available (108 aa)
RBM4BRNA-binding protein 4B-like isoform X2. (160 aa)
fytd1UAP56-interacting factor; Required for mRNA export from the nucleus to the cytoplasm. Acts as an adapter that uses the ddx39b/uap56-nfx1 pathway to ensure efficient mRNA export and delivering to the nuclear pore (By similarity); Belongs to the UIF family. (395 aa)
LOC106611464Serine/arginine-rich splicing factor 5-like. (330 aa)
LOC106606494Zinc finger protein GLIS2-like. (498 aa)
LOC106611639WD40 repeat-containing protein SMU1. (513 aa)
LOC106566414SRSF protein kinase 1-like isoform X1. (697 aa)
ythdc1YTH domain-containing protein 1. (685 aa)
LOC106604944Casein kinase I isoform alpha isoform X2; Belongs to the protein kinase superfamily. (366 aa)
LOC106611977Casein kinase I isoform alpha isoform X1; Belongs to the protein kinase superfamily. (378 aa)
LOC106612789Serine/arginine-rich splicing factor 1B-like. (254 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (659 aa)
sfrs1Splicing factor, arginine/serine-rich 1. (251 aa)
ENSSSAP00000044310annotation not available (64 aa)
LOC106560984SRSF protein kinase 2-like isoform X1. (869 aa)
ddx39Salmo salar ATP-dependent RNA helicase DDX39 (ddx39), mRNA. (444 aa)
LOC100196682Wilms tumor 1 associated protein-like isoform X1. (392 aa)
LOC106599769Serine/arginine-rich splicing factor 11-like isoform X2. (465 aa)
ZNF830Zinc finger protein 830-like. (345 aa)
LOC106608217RNA-binding protein 25-like. (883 aa)
LOC106608275Zinc finger CCCH domain-containing protein 14-like isoform X3. (386 aa)
LOC106570648Serine/arginine-rich splicing factor 4-like. (312 aa)
LOC106581340Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2A-like. (1157 aa)
LOC106574731Protein SON-like isoform X1. (1168 aa)
LOC106601225Probable ATP-dependent RNA helicase DDX17 isoform X1; Belongs to the DEAD box helicase family. (631 aa)
srsf2Serine/arginine-rich splicing factor 2 isoform X1. (222 aa)
LOC106601397Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (634 aa)
rbm25RNA-binding protein 25 isoform X2. (800 aa)
SRSF10-2Serine and arginine rich splicing factor 10. (247 aa)
ENSSSAP00000035404RNA binding motif protein 15. (866 aa)
NR3C1Glucocorticoid receptor-like isoform X2. (806 aa)
dusp11RNA/RNP complex-1-interacting phosphatase isoform X1. (405 aa)
habp4-2Intracellular hyaluronan-binding protein 4 isoform X1. (366 aa)
wtappre-mRNA-splicing regulator WTAP isoform X1. (415 aa)
LOC106585128C8orf4 homolog. (101 aa)
LOC106582688SRSF protein kinase 1-like isoform X1. (639 aa)
LOC106611619Nucleophosmin-like. (322 aa)
fa76bFAM76B. (331 aa)
rad54l2Helicase ARIP4. (1545 aa)
basp1Brain acid soluble protein 1. (228 aa)
LOC106590410Zinc finger protein GLIS2-like. (499 aa)
wt1-2Wilms tumor protein isoform X1. (478 aa)
LOC106571981Serine/arginine-rich splicing factor 6-like. (335 aa)
ENSSSAP00000030197Polymerase (DNA-directed), delta interacting protein 3. (427 aa)
LOC106567088SAP domain-containing ribonucleoprotein-like isoform X1. (214 aa)
LOC100380702Polymerase delta-interacting protein 3 isoform X1. (442 aa)
LOC106573861Serine/arginine-rich splicing factor 11-like. (501 aa)
LOC106589849Serine/arginine-rich splicing factor 2-like. (211 aa)
scnm1Sodium channel modifier 1 isoform X1. (271 aa)
LOC106587831Wilms tumor protein homolog isoform X2. (462 aa)
ENSSSAP00000028300annotation not available (97 aa)
ENSSSAP00000026407annotation not available (166 aa)
SRSF10Serine/arginine-rich splicing factor 10-like. (247 aa)
ENSSSAP00000023196annotation not available (581 aa)
LOC106570375Serine/arginine-rich splicing factor 10-like isoform X1. (344 aa)
LOC106566080Serine/threonine-protein kinase SRPK1. (1008 aa)
LOC106608158Serine/arginine-rich splicing factor 5-like isoform X2. (316 aa)
ENSSSAP00000017280annotation not available (634 aa)
LOC106604736Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like. (1267 aa)
LOC106567767non-POU domain-containing octamer-binding protein-like isoform X1. (443 aa)
srek1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (534 aa)
LOC106568568YTH domain-containing protein 1-like isoform X6. (647 aa)
uap56Spliceosome RNA helicase BAT1. (434 aa)
LOC106568668FAST kinase domain-containing protein 3-like isoform X2. (916 aa)
ENSSSAP00000090487Serine/arginine-rich splicing factor 4-like. (266 aa)
ENSSSAP00000090480annotation not available (99 aa)
habp4Intracellular hyaluronan-binding protein 4. (369 aa)
ENSSSAP00000088449RNA binding motif protein 15. (866 aa)
LOC106611706Diacylglycerol kinase. (922 aa)
LOC106607118Probable ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (566 aa)
LOC106613665Serine/arginine-rich splicing factor 11-like isoform X1. (465 aa)
LOC106571090Serine/arginine-rich splicing factor 5-like isoform X2. (315 aa)
LOC106572836SRSF protein kinase 1-like isoform X1. (877 aa)
LOC106571670RNA-binding protein 25-like isoform X2. (861 aa)
LOC106572303Helicase ARIP4-like. (1436 aa)
LOC106568741UAP56-interacting factor-like isoform X3. (350 aa)
dhx36ATP-dependent RNA helicase DHX36. (780 aa)
ddx39bSalmo salar DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b (ddx39b), mRNA. (478 aa)
LOC106612293Serine/arginine-rich splicing factor 2-like. (214 aa)
LOC106584003Arginine/serine-rich protein PNISR-like isoform X3. (961 aa)
tut1Speckle targeted PIP5K1A-regulated poly(A) polymerase. (800 aa)
LOC106583438Helicase ARIP4-like. (1614 aa)
fusipFUS-interacting serine-arginine-rich protein 1. (271 aa)
INPPL1Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2. (726 aa)
LOC106584470SRSF protein kinase 2-like isoform X2. (877 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.