23 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSSAP00000116029	Retinol binding protein 3. (615 aa)
	LOC106571273	Interphotoreceptor matrix proteoglycan 1-like isoform X3. (1094 aa)
	LOC106584952	Purpurin-like; Belongs to the calycin superfamily. Lipocalin family. (196 aa)
	IMPG2	Interphotoreceptor matrix proteoglycan 2. (1155 aa)
	purp	Purpurin precursor; Belongs to the calycin superfamily. Lipocalin family. (196 aa)
	LOC106580452	Purpurin-like; Belongs to the calycin superfamily. Lipocalin family. (202 aa)
	impg1	Interphotoreceptor matrix proteoglycan 1 isoform X1. (1884 aa)
	LOC106589350	Retinol-binding protein 3-like. (648 aa)
	senp7	Sentrin-specific protease 7 isoform X3. (1101 aa)
	LOC106610691	Interphotoreceptor matrix proteoglycan 1-like. (807 aa)
	LOC106608493	Integumentary mucin C.1-like isoform X3. (1828 aa)
	ENSSSAP00000010830	Retinol binding protein 4, like. (177 aa)
	ENSSSAP00000012244	Interphotoreceptor matrix proteoglycan 2-like. (1362 aa)
	LOC106582153	Interphotoreceptor matrix proteoglycan 2-like isoform X1. (1691 aa)
	vcan	Versican core protein. (364 aa)
	ENSSSAP00000059131	annotation not available (287 aa)
	LOC106574795	Interphotoreceptor matrix proteoglycan 2-like. (1506 aa)
	LOC106578999	Retinol-binding protein 3-like. (638 aa)
	ENSSSAP00000053484	Retinol binding protein 3. (615 aa)
	LOC106574751	Sentrin-specific protease 7-like isoform X1. (921 aa)
	LOC106577282	Fibropellin-1-like. (465 aa)
	LOC106577473	Protein eyes shut homolog. (325 aa)
	LOC106565104	Interphotoreceptor matrix proteoglycan 1-like isoform X1. (1362 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000053484	LOC106565104	ENSSSAP00000053484	ENSSSAP00000023827	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	0.427
ENSSSAP00000053484	LOC106571273	ENSSSAP00000053484	ENSSSAP00000093469	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	0.427
ENSSSAP00000053484	LOC106610691	ENSSSAP00000053484	ENSSSAP00000007758	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like.	0.427
ENSSSAP00000053484	impg1	ENSSSAP00000053484	ENSSSAP00000112419	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1 isoform X1.	0.427
ENSSSAP00000116029	LOC106565104	ENSSSAP00000116029	ENSSSAP00000023827	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	0.427
ENSSSAP00000116029	LOC106571273	ENSSSAP00000116029	ENSSSAP00000093469	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	0.427
ENSSSAP00000116029	LOC106610691	ENSSSAP00000116029	ENSSSAP00000007758	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1-like.	0.427
ENSSSAP00000116029	impg1	ENSSSAP00000116029	ENSSSAP00000112419	Retinol binding protein 3.	Interphotoreceptor matrix proteoglycan 1 isoform X1.	0.427
LOC106565104	ENSSSAP00000053484	ENSSSAP00000023827	ENSSSAP00000053484	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	Retinol binding protein 3.	0.427
LOC106565104	ENSSSAP00000116029	ENSSSAP00000023827	ENSSSAP00000116029	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	Retinol binding protein 3.	0.427
LOC106565104	LOC106578999	ENSSSAP00000023827	ENSSSAP00000053498	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	Retinol-binding protein 3-like.	0.427
LOC106565104	LOC106589350	ENSSSAP00000023827	ENSSSAP00000116027	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	Retinol-binding protein 3-like.	0.427
LOC106571273	ENSSSAP00000053484	ENSSSAP00000093469	ENSSSAP00000053484	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	Retinol binding protein 3.	0.427
LOC106571273	ENSSSAP00000116029	ENSSSAP00000093469	ENSSSAP00000116029	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	Retinol binding protein 3.	0.427
LOC106571273	LOC106578999	ENSSSAP00000093469	ENSSSAP00000053498	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	Retinol-binding protein 3-like.	0.427
LOC106571273	LOC106589350	ENSSSAP00000093469	ENSSSAP00000116027	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	Retinol-binding protein 3-like.	0.427
LOC106574751	LOC106582153	ENSSSAP00000050152	ENSSSAP00000016186	Sentrin-specific protease 7-like isoform X1.	Interphotoreceptor matrix proteoglycan 2-like isoform X1.	0.587
LOC106578999	LOC106565104	ENSSSAP00000053498	ENSSSAP00000023827	Retinol-binding protein 3-like.	Interphotoreceptor matrix proteoglycan 1-like isoform X1.	0.427
LOC106578999	LOC106571273	ENSSSAP00000053498	ENSSSAP00000093469	Retinol-binding protein 3-like.	Interphotoreceptor matrix proteoglycan 1-like isoform X3.	0.427
LOC106578999	LOC106610691	ENSSSAP00000053498	ENSSSAP00000007758	Retinol-binding protein 3-like.	Interphotoreceptor matrix proteoglycan 1-like.	0.427