STRINGSTRING
LOC106605614 LOC106605614 LOC106560538 LOC106560538 LOC106577931 LOC106577931 NCSTN NCSTN NOTCH1 NOTCH1 LOC106571615 LOC106571615 LOC106562852 LOC106562852 LOC106587972 LOC106587972 LOC106587925 LOC106587925 LOC106579992 LOC106579992 LOC106569378 LOC106569378
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106605614Gamma-secretase subunit PEN-2-like. (101 aa)
LOC106560538Neurogenic locus notch homolog protein 1-like isoform X1. (2489 aa)
LOC106577931Gamma-secretase subunit PEN-2. (101 aa)
NCSTNNicastrin. (750 aa)
NOTCH1Neurogenic locus notch homolog protein 1-like isoform X1. (2522 aa)
LOC106571615Gamma-secretase subunit Aph-1b-like. (254 aa)
LOC106562852Gamma-secretase subunit Aph-1b-like. (152 aa)
LOC106587972Gamma-secretase subunit Aph-1b. (440 aa)
LOC106587925Gamma-secretase subunit Aph-1b-like. (105 aa)
LOC106579992Neurogenic locus notch homolog protein 1-like isoform X1. (2523 aa)
LOC106569378Nicastrin-like isoform X1. (698 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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