10 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106584405	Guanine nucleotide-binding protein subunit alpha-11-like. (366 aa)
	GNA14	Guanine nucleotide-binding protein subunit alpha-14-like. (353 aa)
	LOC106580086	Guanine nucleotide-binding protein G(Q) subunit alpha-like. (359 aa)
	LOC106580085	Guanine nucleotide-binding protein subunit alpha-14-like. (359 aa)
	LOC106613802	Guanine nucleotide-binding protein subunit alpha-11 isoform X2. (402 aa)
	LOC106562041	Guanine nucleotide-binding protein subunit alpha-14-like. (354 aa)
	LOC106584406	Guanine nucleotide-binding protein subunit alpha-11-like isoform X3. (402 aa)
	LOC106562028	Guanine nucleotide-binding protein G(Q) subunit alpha-like isoform X1. (358 aa)
	LOC106568348	Guanine nucleotide-binding protein G(Q) subunit alpha-like. (412 aa)
	LOC106574495	Guanine nucleotide-binding protein subunit alpha-11-like isoform X2. (402 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNA14	LOC106584405	ENSSSAP00000087265	ENSSSAP00000100084	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.501
LOC106562028	LOC106584405	ENSSSAP00000079051	ENSSSAP00000100084	Guanine nucleotide-binding protein G(Q) subunit alpha-like isoform X1.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.481
LOC106568348	LOC106584405	ENSSSAP00000102272	ENSSSAP00000100084	Guanine nucleotide-binding protein G(Q) subunit alpha-like.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.482
LOC106574495	LOC106584405	ENSSSAP00000102475	ENSSSAP00000100084	Guanine nucleotide-binding protein subunit alpha-11-like isoform X2.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.502
LOC106580085	LOC106584405	ENSSSAP00000052861	ENSSSAP00000100084	Guanine nucleotide-binding protein subunit alpha-14-like.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.500
LOC106580086	LOC106584405	ENSSSAP00000052837	ENSSSAP00000100084	Guanine nucleotide-binding protein G(Q) subunit alpha-like.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.500
LOC106584405	GNA14	ENSSSAP00000100084	ENSSSAP00000087265	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein subunit alpha-14-like.	0.501
LOC106584405	LOC106562028	ENSSSAP00000100084	ENSSSAP00000079051	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein G(Q) subunit alpha-like isoform X1.	0.481
LOC106584405	LOC106568348	ENSSSAP00000100084	ENSSSAP00000102272	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein G(Q) subunit alpha-like.	0.482
LOC106584405	LOC106574495	ENSSSAP00000100084	ENSSSAP00000102475	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein subunit alpha-11-like isoform X2.	0.502
LOC106584405	LOC106580085	ENSSSAP00000100084	ENSSSAP00000052861	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein subunit alpha-14-like.	0.500
LOC106584405	LOC106580086	ENSSSAP00000100084	ENSSSAP00000052837	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein G(Q) subunit alpha-like.	0.500
LOC106584405	LOC106584406	ENSSSAP00000100084	ENSSSAP00000100221	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein subunit alpha-11-like isoform X3.	0.502
LOC106584405	LOC106613802	ENSSSAP00000100084	ENSSSAP00000072381	Guanine nucleotide-binding protein subunit alpha-11-like.	Guanine nucleotide-binding protein subunit alpha-11 isoform X2.	0.502
LOC106584406	LOC106584405	ENSSSAP00000100221	ENSSSAP00000100084	Guanine nucleotide-binding protein subunit alpha-11-like isoform X3.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.502
LOC106613802	LOC106584405	ENSSSAP00000072381	ENSSSAP00000100084	Guanine nucleotide-binding protein subunit alpha-11 isoform X2.	Guanine nucleotide-binding protein subunit alpha-11-like.	0.502