STRINGSTRING
LOC106561711 LOC106561711 LOC106582877 LOC106582877 LOC106581978 LOC106581978 LOC100136370 LOC100136370 LOC106566543 LOC106566543 LOC106604747 LOC106604747 opn1sw opn1sw LOC106602966 LOC106602966 opn4 opn4 opn4m1a1 opn4m1a1 LOC106586769 LOC106586769 LOC106574444 LOC106574444 LOC106596574 LOC106596574 LOC106583538 LOC106583538 LOC106575253 LOC106575253 LOC101448024 LOC101448024 LOC106576799 LOC106576799 rho rho LOC106597204 LOC106597204 opn4x1b2 opn4x1b2 RHO RHO LOC106605317 LOC106605317 LOC100136941 LOC100136941 LOC100136940 LOC100136940 LOC106590998 LOC106590998
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106561711Parapinopsin-like. (352 aa)
LOC106582877Red-sensitive opsin-like. (357 aa)
LOC106581978Parapinopsin-like. (381 aa)
LOC100136370Rhodopsin. (354 aa)
LOC106566543Parapinopsin-like. (347 aa)
LOC106604747Pinopsin-like. (462 aa)
opn1swShort wavelength-sensitive 1 opsin. (334 aa)
LOC106602966Pinopsin-like isoform X1. (391 aa)
opn4Melanopsin isoform X1. (562 aa)
opn4m1a1Long melanopsin isoform X1. (577 aa)
LOC106586769Parapinopsin-like. (380 aa)
LOC106574444Pinopsin-like. (424 aa)
LOC106596574Red-sensitive opsin-like. (330 aa)
LOC106583538Rhodopsin. (347 aa)
LOC106575253Pinopsin-like. (425 aa)
LOC101448024melanopsin-B. (465 aa)
LOC106576799Opsin-3-like. (386 aa)
rhoRhodopsin. (343 aa)
LOC106597204Pinopsin-like. (429 aa)
opn4x1b2Melanopsin. (369 aa)
RHORhodopsin. (354 aa)
LOC106605317Opsin-3-like. (395 aa)
LOC100136941Short wave-sensitive opsin 2. (354 aa)
LOC100136940Long wave-sensitive opsin isoform X1. (403 aa)
LOC106590998Red-sensitive opsin-like. (358 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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