STRINGSTRING
LOC106589946 LOC106589946 LOC106563948 LOC106563948 LOC106561252 LOC106561252 LOC106563534 LOC106563534 smad9 smad9 LOC106613851 LOC106613851 nfia-2 nfia-2 LOC106585370 LOC106585370 smad1 smad1 LOC106580167 LOC106580167 LOC106584361 LOC106584361 LOC106593023 LOC106593023 LOC106568470 LOC106568470 LOC106588319 LOC106588319 NFIB NFIB smad5 smad5 LOC106608626 LOC106608626 LOC106568180 LOC106568180 LOC106564514 LOC106564514 LOC106601192 LOC106601192 LOC106569881 LOC106569881 smad6 smad6 smad4 smad4 LOC106605446 LOC106605446 SMAD1-2 SMAD1-2 SMAD4 SMAD4 LOC106580048 LOC106580048
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106589946Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (603 aa)
LOC106563948Mothers against decapentaplegic homolog. (554 aa)
LOC106561252Mothers against decapentaplegic homolog. (377 aa)
LOC106563534Mothers against decapentaplegic homolog. (524 aa)
smad9Mothers against decapentaplegic homolog. (467 aa)
LOC106613851Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (535 aa)
nfia-2Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (507 aa)
LOC106585370Mothers against decapentaplegic homolog. (464 aa)
smad1Mothers against decapentaplegic homolog. (474 aa)
LOC106580167Mothers against decapentaplegic homolog. (579 aa)
LOC106584361Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (528 aa)
LOC106593023Mothers against decapentaplegic homolog 6-like. (289 aa)
LOC106568470Mothers against decapentaplegic homolog. (377 aa)
LOC106588319Mothers against decapentaplegic homolog. (587 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (558 aa)
smad5Mothers against decapentaplegic homolog. (468 aa)
LOC106608626Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (595 aa)
LOC106568180Mothers against decapentaplegic homolog. (548 aa)
LOC106564514Nuclear factor 1 X-type-like. (205 aa)
LOC106601192Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (587 aa)
LOC106569881Mothers against decapentaplegic homolog. (589 aa)
smad6Mothers against decapentaplegic homolog. (490 aa)
smad4Mothers against decapentaplegic homolog. (510 aa)
LOC106605446Mothers against decapentaplegic homolog. (565 aa)
SMAD1-2Mothers against decapentaplegic homolog. (481 aa)
SMAD4Mothers against decapentaplegic homolog. (552 aa)
LOC106580048Mothers against decapentaplegic homolog. (467 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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