(32 nodes) GTP binding domain network (Salmo salar)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EHD3-2	EH domain-containing protein 3. (465 aa)
	drg1	Developmentally-regulated GTP-binding protein 1. (386 aa)
	IFI44	Interferon-induced protein 44. (243 aa)
	gnl3l	Guanine nucleotide-binding protein-like 3-like protein. (567 aa)
	LOC106580116	Uncharacterized protein LOC106580116 isoform X1. (458 aa)
	LOC106565861	Guanine nucleotide-binding protein-like 3. (576 aa)
	lsg1	Large subunit GTPase 1 homolog. (665 aa)
	LOC106611647	Nitric oxide-associated protein 1-like. (759 aa)
	LOC106583903	Uncharacterized protein LOC106583903 isoform X2. (455 aa)
	LOC106573916	Interferon-induced protein 44-like isoform X2. (434 aa)
	ola1	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (404 aa)
	LOC106573918	Interferon-induced protein 44-like isoform X1. (559 aa)
	gtpbp8	GTP-binding protein 8. (349 aa)
	LOC106605394	Guanine nucleotide-binding protein-like 1. (618 aa)
	LOC106583018	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (737 aa)
	LOC106562307	Uncharacterized protein LOC106562307. (438 aa)
	gtpbp3	tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (543 aa)
	gtpbp4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (684 aa)
	eral	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (509 aa)
	OLA1	Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (410 aa)
	gtpbp6	GTP-binding protein 6. (565 aa)
	LOC106588301	Uncharacterized protein LOC106588301. (535 aa)
	GNL1	Guanine nucleotide-binding protein-like 1 isoform X1. (619 aa)
	LOC106575246	Interferon-induced protein 44-like. (532 aa)
	gtpba	GTP-binding protein 10. (383 aa)
	drg1-2	Developmentally-regulated GTP-binding protein 1. (376 aa)
	mtg2	Mitochondrial ribosome-associated GTPase 2. (418 aa)
	nog2	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (738 aa)
	LOC106574482	Interferon-induced protein 44-like. (501 aa)
	mtg1	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (319 aa)
	LOC106573866	Large subunit GTPase 1 homolog. (649 aa)
	LOC106583012	Guanine nucleotide-binding protein-like 3. (560 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNL1	LOC106565861	ENSSSAP00000060121	ENSSSAP00000078739	Guanine nucleotide-binding protein-like 1 isoform X1.	Guanine nucleotide-binding protein-like 3.	0.802
GNL1	LOC106583012	ENSSSAP00000060121	ENSSSAP00000110963	Guanine nucleotide-binding protein-like 1 isoform X1.	Guanine nucleotide-binding protein-like 3.	0.802
GNL1	LOC106583018	ENSSSAP00000060121	ENSSSAP00000026738	Guanine nucleotide-binding protein-like 1 isoform X1.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.758
GNL1	eral	ENSSSAP00000060121	ENSSSAP00000071032	Guanine nucleotide-binding protein-like 1 isoform X1.	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.574
GNL1	gnl3l	ENSSSAP00000060121	ENSSSAP00000023234	Guanine nucleotide-binding protein-like 1 isoform X1.	Guanine nucleotide-binding protein-like 3-like protein.	0.802
GNL1	gtpba	ENSSSAP00000060121	ENSSSAP00000048254	Guanine nucleotide-binding protein-like 1 isoform X1.	GTP-binding protein 10.	0.430
GNL1	gtpbp3	ENSSSAP00000060121	ENSSSAP00000031511	Guanine nucleotide-binding protein-like 1 isoform X1.	tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.786
GNL1	gtpbp4	ENSSSAP00000060121	ENSSSAP00000072932	Guanine nucleotide-binding protein-like 1 isoform X1.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.932
GNL1	gtpbp6	ENSSSAP00000060121	ENSSSAP00000066127	Guanine nucleotide-binding protein-like 1 isoform X1.	GTP-binding protein 6.	0.445
GNL1	gtpbp8	ENSSSAP00000060121	ENSSSAP00000101093	Guanine nucleotide-binding protein-like 1 isoform X1.	GTP-binding protein 8.	0.827
GNL1	mtg1	ENSSSAP00000060121	ENSSSAP00000114704	Guanine nucleotide-binding protein-like 1 isoform X1.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.545
GNL1	mtg2	ENSSSAP00000060121	ENSSSAP00000042771	Guanine nucleotide-binding protein-like 1 isoform X1.	Mitochondrial ribosome-associated GTPase 2.	0.430
GNL1	nog2	ENSSSAP00000060121	ENSSSAP00000035103	Guanine nucleotide-binding protein-like 1 isoform X1.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.758
LOC106565861	GNL1	ENSSSAP00000078739	ENSSSAP00000060121	Guanine nucleotide-binding protein-like 3.	Guanine nucleotide-binding protein-like 1 isoform X1.	0.802
LOC106565861	LOC106573866	ENSSSAP00000078739	ENSSSAP00000033201	Guanine nucleotide-binding protein-like 3.	Large subunit GTPase 1 homolog.	0.877
LOC106565861	LOC106583018	ENSSSAP00000078739	ENSSSAP00000026738	Guanine nucleotide-binding protein-like 3.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.987
LOC106565861	LOC106605394	ENSSSAP00000078739	ENSSSAP00000025749	Guanine nucleotide-binding protein-like 3.	Guanine nucleotide-binding protein-like 1.	0.802
LOC106565861	eral	ENSSSAP00000078739	ENSSSAP00000071032	Guanine nucleotide-binding protein-like 3.	GTPase Era, mitochondrial; Probable GTPase that plays a role in the mitochondrial ribosomal small subunit assembly. Specifically binds the 12S mitochondrial rRNA (12S mt-rRNA) to a 33 nucleotide section delineating the 3' terminal stem-loop region. May act as a chaperone that protects the 12S mt-rRNA on the 28S mitoribosomal subunit during ribosomal small subunit assembly (By similarity); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.574
LOC106565861	gtpba	ENSSSAP00000078739	ENSSSAP00000048254	Guanine nucleotide-binding protein-like 3.	GTP-binding protein 10.	0.430
LOC106565861	gtpbp3	ENSSSAP00000078739	ENSSSAP00000031511	Guanine nucleotide-binding protein-like 3.	tRNA modification GTPase GTPBP3, mitochondrial isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.786