6 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106609199	Neural Wiskott-Aldrich syndrome protein-like isoform X1. (498 aa)
	LOC106572383	wiskott-Aldrich syndrome protein homolog. (509 aa)
	LOC106583152	wiskott-Aldrich syndrome protein homolog isoform X3. (366 aa)
	LOC106567248	Wiskott-Aldrich syndrome protein homolog. (506 aa)
	WASL	Neural Wiskott-Aldrich syndrome protein-like isoform X1. (509 aa)
	wasl	Neural Wiskott-Aldrich syndrome protein isoform X1. (540 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106567248	LOC106572383	ENSSSAP00000090907	ENSSSAP00000081054	Wiskott-Aldrich syndrome protein homolog.	wiskott-Aldrich syndrome protein homolog.	0.901
LOC106572383	LOC106567248	ENSSSAP00000081054	ENSSSAP00000090907	wiskott-Aldrich syndrome protein homolog.	Wiskott-Aldrich syndrome protein homolog.	0.901
LOC106583152	WASL	ENSSSAP00000088364	ENSSSAP00000099456	wiskott-Aldrich syndrome protein homolog isoform X3.	Neural Wiskott-Aldrich syndrome protein-like isoform X1.	0.907
WASL	LOC106583152	ENSSSAP00000099456	ENSSSAP00000088364	Neural Wiskott-Aldrich syndrome protein-like isoform X1.	wiskott-Aldrich syndrome protein homolog isoform X3.	0.907