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exosc8 exosc8 LOC106613766 LOC106613766 hs90b hs90b exos4 exos4 rs2 rs2 exosc9 exosc9 mlh3 mlh3 eftud1 eftud1 LOC106577161 LOC106577161 exosc6 exosc6 lonp2 lonp2 LOC106562275 LOC106562275 pms1 pms1 HSP90B1 HSP90B1 lonp1 lonp1 LOC106600990 LOC106600990 trap1 trap1 LOC106600009 LOC106600009 mvk mvk LOC106569524 LOC106569524 exosc7 exosc7 LOC106585666 LOC106585666 PNPT1-2 PNPT1-2 LOC106608355 LOC106608355 top2a top2a gfm1 gfm1 LOC106609356 LOC106609356 gfm2 gfm2 LOC106588671 LOC106588671 LOC106570304 LOC106570304 RPS16 RPS16 hs90a hs90a fcsk fcsk rs16 rs16 galk2 galk2 exosc5 exosc5 pms2 pms2 LOC106608136 LOC106608136 LOC106612544 LOC106612544 impact impact erg19 erg19 mlh1 mlh1 hsp90ab1 hsp90ab1 LOC106574616 LOC106574616 PNPT1 PNPT1 ef2 ef2 galk1 galk1 EXOS9 EXOS9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exosc8Exosome complex component RRP43. (704 aa)
LOC106613766Elongation factor 2-like isoform X1. (875 aa)
hs90bHeat shock protein HSP 90-beta isoform X1. (718 aa)
exos4Exosome complex exonuclease RRP41. (245 aa)
rs240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (375 aa)
exosc9Exosome complex component RRP45. (524 aa)
mlh3DNA mismatch repair protein Mlh3 isoform X2. (1207 aa)
eftud1Elongation factor Tu GTP-binding domain-containing protein 1. (483 aa)
LOC10657716128S ribosomal protein S5, mitochondrial-like. (259 aa)
exosc6Exosome complex exonuclease MTR3. (277 aa)
lonp2Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-. (923 aa)
LOC106562275Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (403 aa)
pms1PMS1 protein homolog 1 isoform X2. (914 aa)
HSP90B1Endoplasmin-like. (818 aa)
lonp1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1014 aa)
LOC106600990116 kDa U5 small nuclear ribonucleoprotein component. (970 aa)
trap1Heat shock protein 75 kDa, mitochondrial. (733 aa)
LOC106600009Elongation factor 2-like. (868 aa)
mvkMevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (398 aa)
LOC106569524Elongation factor 2-like. (881 aa)
exosc7Exosome complex exonuclease RRP42. (316 aa)
LOC106585666Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (405 aa)
PNPT1-2Polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1. (777 aa)
LOC10660835528S ribosomal protein S5, mitochondrial-like; Belongs to the universal ribosomal protein uS5 family. (410 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1560 aa)
gfm1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...] (814 aa)
LOC106609356Endoplasmin-like. (845 aa)
gfm2Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (776 aa)
LOC106588671DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1657 aa)
LOC106570304DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1655 aa)
RPS1640S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (171 aa)
hs90aHeat shock protein HSP 90-alpha 1-like. (770 aa)
fcskL-fucose kinase. (1076 aa)
rs1640S ribosomal protein S16 isoform X1; Belongs to the universal ribosomal protein uS9 family. (146 aa)
galk2N-acetylgalactosamine kinase. (474 aa)
exosc5Exosome complex component RRP46 isoform X1. (228 aa)
pms2Mismatch repair endonuclease PMS2 isoform X1. (911 aa)
LOC106608136Heat shock protein HSP 90-alpha-like. (774 aa)
LOC106612544Glucuronokinase 1-like isoform X1. (623 aa)
impactProtein IMPACT isoform X1. (585 aa)
erg19Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (403 aa)
mlh1DNA mismatch repair protein Mlh1. (729 aa)
hsp90ab1Heat shock protein HSP 90-beta. (740 aa)
LOC10657461628S ribosomal protein S9, mitochondrial-like. (405 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1, mitochondrial-like. (779 aa)
ef2Elongation factor 2. (880 aa)
galk1Galactokinase isoform X1. (674 aa)
EXOS9Exosome complex component RRP45-like. (94 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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