STRINGSTRING
LOC106578716 LOC106578716 REV3L REV3L i20l1 i20l1 rnaseh1 rnaseh1 exd3 exd3 wrn wrn pan2 pan2 LOC100194703 LOC100194703 LOC106561442 LOC106561442 LOC106612523 LOC106612523 LOC106584366 LOC106584366 LOC106566074 LOC106566074 DPOD1 DPOD1 LOC106565892 LOC106565892 LOC100380853 LOC100380853 LOC106582818 LOC106582818 LOC106566552 LOC106566552 thex1 thex1 LOC106569767 LOC106569767 isg20l2 isg20l2 rexo4 rexo4 LOC106607739 LOC106607739 pole pole LOC106611069 LOC106611069 exd2 exd2 LOC106594655 LOC106594655 LOC106594665 LOC106594665 LOC106590642 LOC106590642 rexo2 rexo2 LOC106566723 LOC106566723 LOC106568803 LOC106568803 LOC106572284 LOC106572284 LOC106560218 LOC106560218 LOC106592686 LOC106592686 cnot8 cnot8 LOC106570475 LOC106570475 LOC106561082 LOC106561082 LOC106562415 LOC106562415 LOC106583892 LOC106583892 pol3 pol3 LOC106599786 LOC106599786 LOC106592141 LOC106592141 LOC106601583 LOC106601583 LOC106593600 LOC106593600 LOC106566551 LOC106566551 LOC106603492 LOC106603492 piwil1 piwil1 LOC106599369 LOC106599369 exosc10 exosc10 pola1 pola1 LOC106568724 LOC106568724 LOC106588472 LOC106588472 LOC106563093 LOC106563093 LOC106575331 LOC106575331 LOC106570150 LOC106570150 LOC106564474 LOC106564474 LOC106563692 LOC106563692 LOC106607526 LOC106607526 ISG20L2 ISG20L2 LOC106584653 LOC106584653 LOC106591874 LOC106591874 poln poln toe1 toe1 LOC106570038 LOC106570038 LOC106585230 LOC106585230 LOC106580913 LOC106580913 LOC106613849 LOC106613849 LOC106591310 LOC106591310 LOC106596922 LOC106596922 LOC106570743 LOC106570743 LOC106601920 LOC106601920 LOC106600668 LOC106600668 LOC106564134 LOC106564134 LOC106562578 LOC106562578 LOC106564655 LOC106564655 LOC106608109 LOC106608109 LOC106611608 LOC106611608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106578716Uncharacterized protein LOC106578716. (1116 aa)
REV3LDNA polymerase zeta catalytic subunit-like isoform X1. (3016 aa)
i20l1Interferon-stimulated 20 kDa exonuclease-like 1 isoform X1. (378 aa)
rnaseh1Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (293 aa)
exd3Exonuclease mut-7 homolog isoform X1. (896 aa)
wrnWerner syndrome ATP-dependent helicase isoform X2. (1467 aa)
pan2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1197 aa)
LOC100194703Transposase-like. (338 aa)
LOC106561442Uncharacterized protein LOC106561442. (2312 aa)
LOC106612523Uncharacterized protein LOC106612523. (1165 aa)
LOC106584366RNA exonuclease 1 homolog. (1298 aa)
LOC106566074Uncharacterized protein LOC106566074. (552 aa)
DPOD1DNA polymerase. (899 aa)
LOC106565892Uncharacterized protein LOC106565892. (724 aa)
LOC100380853Transposon Tf2-1 polyprotein. (568 aa)
LOC106582818Protein argonaute-1 isoform X7; Belongs to the argonaute family. (903 aa)
LOC106566552Uncharacterized protein LOC106566552. (635 aa)
thex1Histone mRNA 3-exonuclease 1. (346 aa)
LOC106569767Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (878 aa)
isg20l2Interferon-stimulated 20 kDa exonuclease-like 2. (336 aa)
rexo4REX4, RNA exonuclease 4 homolog isoform X1. (444 aa)
LOC106607739DNA polymerase zeta catalytic subunit-like isoform X2. (3040 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
LOC106611069Exonuclease 3'-5' domain-containing protein 1-like. (601 aa)
exd2Exonuclease 3'-5' domain-containing protein 2. (421 aa)
LOC106594655ERI1 exoribonuclease 2-like. (883 aa)
LOC106594665Putative RNA exonuclease NEF-sp. (770 aa)
LOC106590642Collagen alpha-1(XI) chain-like. (375 aa)
rexo2Oligoribonuclease, mitochondrial. (289 aa)
LOC106566723Uncharacterized protein K02A2.6-like isoform X1. (1097 aa)
LOC106568803Uncharacterized protein LOC106568803. (311 aa)
LOC106572284Uncharacterized protein LOC106572284. (444 aa)
LOC106560218LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like. (426 aa)
LOC106592686Uncharacterized protein LOC106592686. (499 aa)
cnot8CCR4-NOT transcription complex subunit 8. (285 aa)
LOC106570475Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (893 aa)
LOC106561082Uncharacterized protein LOC106561082. (530 aa)
LOC106562415Epithelial splicing regulatory protein 2-like isoform X1. (743 aa)
LOC106583892Uncharacterized protein LOC106583892; Belongs to the heat shock protein 70 family. (460 aa)
pol3Retrovirus-related Pol polyprotein from transposon 17.6 isoform X1. (388 aa)
LOC106599786Exonuclease 3'-5' domain-containing protein 1-like isoform X2. (275 aa)
LOC106592141Uncharacterized protein LOC106592141. (322 aa)
LOC106601583Uncharacterized protein LOC106601583 isoform X1. (548 aa)
LOC106593600poly(A)-specific ribonuclease PARN-like. (753 aa)
LOC106566551Uncharacterized protein LOC106599233. (1087 aa)
LOC106603492CCR4-NOT transcription complex subunit 7 isoform X2. (300 aa)
piwil1Piwi-like protein 1; Belongs to the argonaute family. (873 aa)
LOC106599369Target of EGR1 protein 1-like. (510 aa)
exosc10Exosome component 10. (1008 aa)
pola1DNA polymerase. (1466 aa)
LOC106568724RNA exonuclease 4-like. (491 aa)
LOC106588472Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (891 aa)
LOC106563093Uncharacterized protein LOC106563093. (951 aa)
LOC106575331Uncharacterized protein LOC106575331. (1365 aa)
LOC106570150Uncharacterized protein LOC106570150. (1032 aa)
LOC106564474Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (309 aa)
LOC1065636923'-5' exoribonuclease 1-like isoform X1. (337 aa)
LOC106607526Uncharacterized protein K02A2.6-like isoform X1. (388 aa)
ISG20L2Interferon-stimulated 20 kDa exonuclease-like 2. (333 aa)
LOC106584653Apoptosis-enhancing nuclease-like. (368 aa)
LOC106591874Exonuclease 3'-5' domain-containing protein 2-like. (550 aa)
polnDNA polymerase nu. (1656 aa)
toe1Target of EGR1 protein 1. (528 aa)
LOC106570038Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (887 aa)
LOC106585230LOW QUALITY PROTEIN: uncharacterized protein LOC106585230. (1589 aa)
LOC106580913Uncharacterized protein K02A2.6-like. (381 aa)
LOC106613849RNA exonuclease 1 homolog. (1313 aa)
LOC106591310Uncharacterized protein LOC106591310. (161 aa)
LOC106596922Protein PML-like. (447 aa)
LOC106570743Epithelial splicing regulatory protein 1-like. (522 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
LOC106600668Uncharacterized protein LOC106600668. (847 aa)
LOC106564134Uncharacterized protein LOC106564134. (1187 aa)
LOC106562578Uncharacterized protein LOC106562578 isoform X1. (362 aa)
LOC106564655Transcription elongation factor, mitochondrial-like. (367 aa)
LOC106608109Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (300 aa)
LOC106611608Uncharacterized protein LOC106611608. (941 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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