22 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106568008	Uncharacterized protein LOC106568008. (908 aa)
	LOC106578940	Metastasis-associated protein MTA3-like. (703 aa)
	LOC106610622	Bromo adjacent homology domain-containing 1 protein-like isoform X1. (850 aa)
	LOC106603482	AT-rich interactive domain-containing protein 5B-like. (940 aa)
	LOC106607210	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1527 aa)
	LOC106570476	GATA zinc finger domain-containing protein 1. (245 aa)
	LOC106566360	Arginine-glutamic acid dipeptide repeats protein-like. (557 aa)
	LOC106565587	LOW QUALITY PROTEIN: protein polybromo-1-like. (1663 aa)
	LOC106565336	Protein polybromo-1-like isoform X1. (1682 aa)
	LOC106583529	Protein polybromo-1-like isoform X1. (1706 aa)
	LOC106608351	Bromo adjacent homology domain-containing 1 protein-like isoform X1. (809 aa)
	LOC106589409	Metastasis-associated protein MTA3-like isoform X1. (707 aa)
	bahcc1	BAH and coiled-coil domain-containing protein 1 isoform X2. (2832 aa)
	LOC106571566	Bromo adjacent homology domain-containing 1 protein-like isoform X1. (876 aa)
	LOC100380772	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1531 aa)
	LOC106608586	Metastasis-associated protein MTA2-like isoform X2. (687 aa)
	LOC106608075	Bromo adjacent homology domain-containing 1 protein-like isoform X1. (881 aa)
	mta1	Metastasis-associated protein MTA1. (717 aa)
	orc1	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (883 aa)
	LOC106588182	Histone-lysine N-methyltransferase ASH1L-like isoform X2. (3000 aa)
	LOC106610139	BAH and coiled-coil domain-containing protein 1-like. (2939 aa)
	LOC106570093	Histone-lysine N-methyltransferase ASH1L-like isoform X3. (3078 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100380772	LOC106570093	ENSSSAP00000038496	ENSSSAP00000013178	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Histone-lysine N-methyltransferase ASH1L-like isoform X3.	0.450
LOC100380772	LOC106588182	ENSSSAP00000038496	ENSSSAP00000059283	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Histone-lysine N-methyltransferase ASH1L-like isoform X2.	0.450
LOC106565336	LOC106568008	ENSSSAP00000111526	ENSSSAP00000060539	Protein polybromo-1-like isoform X1.	Uncharacterized protein LOC106568008.	0.437
LOC106565336	LOC106603482	ENSSSAP00000111526	ENSSSAP00000023547	Protein polybromo-1-like isoform X1.	AT-rich interactive domain-containing protein 5B-like.	0.437
LOC106565587	LOC106568008	ENSSSAP00000115621	ENSSSAP00000060539	LOW QUALITY PROTEIN: protein polybromo-1-like.	Uncharacterized protein LOC106568008.	0.437
LOC106565587	LOC106603482	ENSSSAP00000115621	ENSSSAP00000023547	LOW QUALITY PROTEIN: protein polybromo-1-like.	AT-rich interactive domain-containing protein 5B-like.	0.437
LOC106568008	LOC106565336	ENSSSAP00000060539	ENSSSAP00000111526	Uncharacterized protein LOC106568008.	Protein polybromo-1-like isoform X1.	0.437
LOC106568008	LOC106565587	ENSSSAP00000060539	ENSSSAP00000115621	Uncharacterized protein LOC106568008.	LOW QUALITY PROTEIN: protein polybromo-1-like.	0.437
LOC106568008	LOC106583529	ENSSSAP00000060539	ENSSSAP00000095759	Uncharacterized protein LOC106568008.	Protein polybromo-1-like isoform X1.	0.437
LOC106570093	LOC100380772	ENSSSAP00000013178	ENSSSAP00000038496	Histone-lysine N-methyltransferase ASH1L-like isoform X3.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.450
LOC106570093	LOC106607210	ENSSSAP00000013178	ENSSSAP00000020304	Histone-lysine N-methyltransferase ASH1L-like isoform X3.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.450
LOC106570093	orc1	ENSSSAP00000013178	ENSSSAP00000043828	Histone-lysine N-methyltransferase ASH1L-like isoform X3.	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.	0.414
LOC106583529	LOC106568008	ENSSSAP00000095759	ENSSSAP00000060539	Protein polybromo-1-like isoform X1.	Uncharacterized protein LOC106568008.	0.437
LOC106583529	LOC106603482	ENSSSAP00000095759	ENSSSAP00000023547	Protein polybromo-1-like isoform X1.	AT-rich interactive domain-containing protein 5B-like.	0.437
LOC106588182	LOC100380772	ENSSSAP00000059283	ENSSSAP00000038496	Histone-lysine N-methyltransferase ASH1L-like isoform X2.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.450
LOC106588182	LOC106607210	ENSSSAP00000059283	ENSSSAP00000020304	Histone-lysine N-methyltransferase ASH1L-like isoform X2.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.450
LOC106588182	orc1	ENSSSAP00000059283	ENSSSAP00000043828	Histone-lysine N-methyltransferase ASH1L-like isoform X2.	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.	0.414
LOC106603482	LOC106565336	ENSSSAP00000023547	ENSSSAP00000111526	AT-rich interactive domain-containing protein 5B-like.	Protein polybromo-1-like isoform X1.	0.437
LOC106603482	LOC106565587	ENSSSAP00000023547	ENSSSAP00000115621	AT-rich interactive domain-containing protein 5B-like.	LOW QUALITY PROTEIN: protein polybromo-1-like.	0.437
LOC106603482	LOC106583529	ENSSSAP00000023547	ENSSSAP00000095759	AT-rich interactive domain-containing protein 5B-like.	Protein polybromo-1-like isoform X1.	0.437