STRINGSTRING
papd4 papd4 tent4a tent4a LOC106613677 LOC106613677 LOC106588764 LOC106588764 LOC106585409 LOC106585409 tut1 tut1 LOC106576788 LOC106576788 LOC106585979 LOC106585979 LOC106573258 LOC106573258 LOC106588321 LOC106588321 papd5 papd5 LOC106580325 LOC106580325 LOC106560426 LOC106560426 ilf3 ilf3 polb polb LOC106580473 LOC106580473 LOC106601349 LOC106601349 LOC100380868 LOC100380868 LOC106608231 LOC106608231 zfr zfr LOC106561621 LOC106561621 LOC106569276 LOC106569276 STRBP STRBP LOC106605322 LOC106605322 LOC106599868 LOC106599868 malsu1 malsu1 LOC106584061 LOC106584061 LOC106564589 LOC106564589 LOC106580022 LOC106580022 LOC106564530 LOC106564530 LOC106569884 LOC106569884 LOC106573822 LOC106573822 papolg papolg LOC106588695 LOC106588695 LOC106587575 LOC106587575 trnt1 trnt1 LOC106578552 LOC106578552
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
papd4poly(A) RNA polymerase GLD2. (471 aa)
tent4aNon-canonical poly(A) RNA polymerase PAPD7 isoform X2. (764 aa)
LOC106613677Zinc finger RNA-binding protein-like isoform X1. (1024 aa)
LOC106588764DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (542 aa)
LOC106585409Spermatid perinuclear RNA-binding protein-like. (726 aa)
tut1Speckle targeted PIP5K1A-regulated poly(A) polymerase. (800 aa)
LOC106576788DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (511 aa)
LOC106585979LOW QUALITY PROTEIN: terminal uridylyltransferase 7-like. (1079 aa)
LOC106573258Non-canonical poly(A) RNA polymerase PAPD5-like. (686 aa)
LOC106588321Interleukin enhancer-binding factor 2 homolog. (387 aa)
papd5Non-canonical poly(A) RNA polymerase PAPD5 isoform X2. (614 aa)
LOC106580325Interleukin enhancer-binding factor 2 homolog. (394 aa)
LOC106560426Terminal uridylyltransferase 4-like isoform X2. (1559 aa)
ilf3Interleukin enhancer-binding factor 3 homolog isoform X1. (843 aa)
polbDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (344 aa)
LOC106580473DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (312 aa)
LOC106601349Interleukin enhancer-binding factor 3 homolog isoform X1. (844 aa)
LOC100380868Terminal uridylyltransferase 7. (897 aa)
LOC106608231poly(A) polymerase alpha-like isoform X1. (776 aa)
zfrZinc finger RNA-binding protein isoform X6. (1087 aa)
LOC106561621Spermatid perinuclear RNA-binding protein-like isoform X4. (754 aa)
LOC106569276DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (554 aa)
STRBPSpermatid perinuclear RNA-binding protein. (810 aa)
LOC106605322DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (510 aa)
LOC106599868Zinc finger RNA-binding protein-like. (61 aa)
malsu1CG030 protein. (243 aa)
LOC106584061Terminal uridylyltransferase 4-like isoform X2. (1565 aa)
LOC106564589DNA polymerase lambda-like; Belongs to the DNA polymerase type-X family. (565 aa)
LOC106580022Spermatid perinuclear RNA-binding protein-like isoform X1. (684 aa)
LOC106564530Interleukin enhancer-binding factor 3-like isoform X3. (917 aa)
LOC106569884Interleukin enhancer-binding factor 2 homolog. (387 aa)
LOC106573822Zinc finger RNA-binding protein-like isoform X1. (1051 aa)
papolgpoly(A) polymerase gamma. (836 aa)
LOC106588695Non-canonical poly(A) RNA polymerase PAPD7-like isoform X1. (766 aa)
LOC106587575Non-canonical poly(A) RNA polymerase PAPD5-like. (648 aa)
trnt1CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (430 aa)
LOC106578552poly(A) RNA polymerase, mitochondrial-like. (582 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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