STRINGSTRING
LOC106567593 LOC106567593 LOC106591826 LOC106591826 LOC106564697 LOC106564697 LOC106587408 LOC106587408 ska2 ska2 LOC106582993 LOC106582993 LOC106588385 LOC106588385 LOC106565748 LOC106565748 LOC106586766 LOC106586766 LOC106575642 LOC106575642 LOC106575627 LOC106575627 LOC106588513 LOC106588513 LOC106572223 LOC106572223 LOC100380769 LOC100380769 LOC106602577 LOC106602577 LOC100286423 LOC100286423 LOC106576681 LOC106576681 LOC106606477 LOC106606477 LOC106572377 LOC106572377 cfdp1 cfdp1 LOC106567313 LOC106567313 LOC106603967 LOC106603967 LOC106565886 LOC106565886 LOC106566827 LOC106566827 LOC106563135 LOC106563135 LOC106579217 LOC106579217 LOC106588190 LOC106588190 SSRP1 SSRP1 LOC106574650 LOC106574650 tert tert LOC106602874 LOC106602874 parp1 parp1 LOC106574954 LOC106574954 LOC106569940 LOC106569940 LOC106567640 LOC106567640 LOC106569359 LOC106569359 LOC106584895 LOC106584895 spdl1 spdl1 LOC106578255 LOC106578255 LOC106567479 LOC106567479 LOC106570811 LOC106570811 terf1 terf1 H1X H1X LOC106575912 LOC106575912 LOC106608632 LOC106608632 actr8 actr8 H1 H1 LOC106562237 LOC106562237 LOC106598639 LOC106598639 LOC106599169 LOC106599169
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106567593Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106591826FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (409 aa)
LOC106564697CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
LOC106587408Retinitis pigmentosa 1-like 1 protein isoform X1. (682 aa)
ska2Spindle and kinetochore-associated protein 2; Component of the SKA1 complex, a microtubule-binding subcomplex of the outer kinetochore that is essential for proper chromosome segregation. Required for timely anaphase onset during mitosis, when chromosomes undergo bipolar attachment on spindle microtubules leading to silencing of the spindle checkpoint. The SKA1 complex is a direct component of the kinetochore-microtubule interface and directly associates with microtubules as oligomeric assemblies. The complex facilitates the processive movement of microspheres along a microtubule in a [...] (228 aa)
LOC106582993Heterochromatin protein 1-binding protein 3-like. (552 aa)
LOC106588385Histone H3-like centromeric protein A. (155 aa)
LOC106565748Histone-lysine N-methyltransferase SETMAR-like. (304 aa)
LOC106586766CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (439 aa)
LOC106575642Histone H2A; Belongs to the histone H2A family. (139 aa)
LOC106575627Histone H2A; Belongs to the histone H2A family. (139 aa)
LOC106588513Histone-lysine N-methyltransferase EHMT2-like isoform X1. (1186 aa)
LOC106572223Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (443 aa)
LOC100380769Histone-lysine N-methyltransferase EHMT2 isoform X2. (1265 aa)
LOC106602577FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (670 aa)
LOC100286423FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
LOC106576681Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (371 aa)
LOC106606477Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (371 aa)
LOC106572377Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (461 aa)
cfdp1Craniofacial development protein 1; May play a role during embryogenesis. (317 aa)
LOC106567313Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (375 aa)
LOC106603967Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (371 aa)
LOC106565886Heterochromatin protein 1-binding protein 3-like. (625 aa)
LOC106566827Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (412 aa)
LOC106563135Histone-lysine N-methyltransferase EHMT1-like isoform X2. (1307 aa)
LOC106579217H1 histone family, member 0 like 1. (198 aa)
LOC106588190Histone-lysine N-methyltransferase SETDB1-B-like. (1033 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (705 aa)
LOC106574650Histone-lysine N-methyltransferase SETDB2-like. (667 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1151 aa)
LOC106602874Histone H2A; Belongs to the histone H2A family. (142 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1030 aa)
LOC106574954Histone-lysine N-methyltransferase SETDB1-B-like. (1258 aa)
LOC106569940Histone H3-like centromeric protein A. (153 aa)
LOC106567640Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC106569359Histone H2B; Belongs to the histone H2B family. (116 aa)
LOC106584895Histone H2A; Belongs to the histone H2A family. (170 aa)
spdl1Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family. (587 aa)
LOC106578255H1 histone family member 0 like protein. (198 aa)
LOC106567479Histone-lysine N-methyltransferase EHMT1-like isoform X5. (1304 aa)
LOC106570811Histone H2A; Belongs to the histone H2A family. (129 aa)
terf1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (379 aa)
H1XHistone H1x. (190 aa)
LOC106575912Stress response protein NST1-like isoform X1. (545 aa)
LOC106608632Histone H2A; Belongs to the histone H2A family. (128 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily. (659 aa)
H1Histone H1-like. (179 aa)
LOC106562237Uncharacterized protein LOC106562237 isoform X2. (1941 aa)
LOC106598639Histone H3-like. (136 aa)
LOC106599169Histone H3-like. (136 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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