STRINGSTRING
rbx1-2 rbx1-2 pole3 pole3 ENSSSAP00000079200 ENSSSAP00000079200 LOC106561926 LOC106561926 ENSSSAP00000102908 ENSSSAP00000102908 LOC106577118 LOC106577118 LOC106564654 LOC106564654 LOC106575507 LOC106575507 LOC106599031-2 LOC106599031-2 wdr48 wdr48 pole2 pole2 ENSSSAP00000112721 ENSSSAP00000112721 rad18 rad18 CG024 CG024 rcbtb2 rcbtb2 ENSSSAP00000071551 ENSSSAP00000071551 ENSSSAP00000071155 ENSSSAP00000071155 LOC106561074 LOC106561074 LOC106580445 LOC106580445 dtl dtl ENSSSAP00000065248 ENSSSAP00000065248 LOC106612933 LOC106612933 LOC106574681 LOC106574681 LOC100194654 LOC100194654 LOC106588659 LOC106588659 rpa2 rpa2 rfa1 rfa1 LOC106599031 LOC106599031 ENSSSAP00000047854 ENSSSAP00000047854 DPOD1 DPOD1 ENSSSAP00000044108 ENSSSAP00000044108 usp1 usp1 ENSSSAP00000036217 ENSSSAP00000036217 rfc3 rfc3 rbx1 rbx1 CUL4B CUL4B pold4 pold4 pold3 pold3 meiob meiob ENSSSAP00000012232 ENSSSAP00000012232 rfc2 rfc2 RCBTB1 RCBTB1 LOC106613702 LOC106613702 LOC106613703 LOC106613703 LOC106574804 LOC106574804 ENSSSAP00000016601 ENSSSAP00000016601 LOC106583181 LOC106583181 PCNA PCNA ENSSSAP00000019392 ENSSSAP00000019392 ENSSSAP00000019398 ENSSSAP00000019398 ENSSSAP00000019926 ENSSSAP00000019926 LOC106584674 LOC106584674 WDR48 WDR48 LOC106562992 LOC106562992 LOC106598394 LOC106598394 LOC106601920 LOC106601920 LOC106606528 LOC106606528 ddb1 ddb1 LOC100194659 LOC100194659 LOC106570310 LOC106570310 LOC100136537 LOC100136537 LOC106573554 LOC106573554 dpoe4 dpoe4 ENSSSAP00000090923 ENSSSAP00000090923 pold2 pold2 WDR48-2 WDR48-2 DTL DTL cul4b cul4b rfc4 rfc4 rpa3 rpa3 LOC106605109 LOC106605109 ENSSSAP00000088520 ENSSSAP00000088520 pole pole rfc5 rfc5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbx1-2Salmo salar ring-box 1 (rbx1), mRNA. (108 aa)
pole3DNA-directed DNA polymerase epsilon 3. (151 aa)
ENSSSAP00000079200Replication factor C (activator 1) 2. (372 aa)
LOC106561926DNA damage-binding protein 1-like isoform X1. (1139 aa)
ENSSSAP00000102908annotation not available (83 aa)
LOC106577118ubiquitin-40S ribosomal protein S27a. (156 aa)
LOC106564654ATPase family AAA domain-containing protein 5-like isoform X2. (547 aa)
LOC106575507RCC1 and BTB domain-containing protein 1-like isoform X4. (700 aa)
LOC106599031-2ubiquitin-60S ribosomal protein L40-like. (128 aa)
wdr48WD repeat-containing protein 48 isoform X3. (706 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (567 aa)
ENSSSAP00000112721annotation not available (332 aa)
rad18E3 ubiquitin-protein ligase RAD18 isoform X2. (501 aa)
CG024CG024 protein precursor. (74 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (492 aa)
ENSSSAP00000071551annotation not available (131 aa)
ENSSSAP00000071155annotation not available (73 aa)
LOC106561074kxDL motif-containing protein 1-like isoform X1. (185 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
dtlDenticleless protein homolog. (673 aa)
ENSSSAP00000065248annotation not available (188 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
LOC106574681RCC1 and BTB domain-containing protein 1-like isoform X3. (631 aa)
LOC100194654Salmo salar ribosomal protein S27-3 (LOC100194654), mRNA. (173 aa)
LOC106588659Replication protein A 32 kDa subunit-A-like isoform X1. (266 aa)
rpa2Replication protein A 32 kDa subunit. (278 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
LOC106599031Ubiquitin A-52 residue ribosomal protein fusion product 1like 2. (128 aa)
ENSSSAP00000047854annotation not available (265 aa)
DPOD1DNA polymerase. (899 aa)
ENSSSAP00000044108annotation not available (850 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (826 aa)
ENSSSAP00000036217annotation not available (352 aa)
rfc3Replication factor C subunit 3 isoform X1. (334 aa)
rbx1RING-box protein 1; E3 ubiquitin ligase component of multiple cullin-RING-based E3 ubiquitin-protein ligase (CRLs) complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins, including proteins involved in cell cycle progression, signal transduction, transcription and transcription-coupled nucleotide excision repair. CRLs complexes and arih1 collaborate in tandem to mediate ubiquitination of target proteins, arih1 mediating addition of the first ubiquitin on CRLs targets. The functional specificity of the E3 ubiquitin-protein ligase complexes d [...] (108 aa)
CUL4Bcullin-4B-like isoform X1; Belongs to the cullin family. (899 aa)
pold4DNA polymerase subunit delta-4. (125 aa)
pold3DNA polymerase delta subunit 3 isoform X1. (449 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
ENSSSAP00000012232annotation not available (93 aa)
rfc2Replication factor C subunit 2. (381 aa)
RCBTB1RCC1 and BTB domain-containing protein 1-like isoform X1. (572 aa)
LOC106613702C-C motif chemokine 17-like. (188 aa)
LOC106613703DNA polymerase epsilon subunit 4-like. (149 aa)
LOC106574804cullin-4A-like; Belongs to the cullin family. (642 aa)
ENSSSAP00000016601annotation not available (175 aa)
LOC106583181E3 ubiquitin-protein ligase RAD18-like isoform X1. (584 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
ENSSSAP00000019398annotation not available (114 aa)
ENSSSAP00000019926annotation not available (202 aa)
LOC106584674kxDL motif-containing protein 1-like. (187 aa)
WDR48WD repeat-containing protein 48-like isoform X1. (714 aa)
LOC106562992polyubiquitin-B. (305 aa)
LOC106598394cullin-4A-like isoform X1; Belongs to the cullin family. (514 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
LOC106606528ATPase family AAA domain-containing protein 5-like isoform X1. (1873 aa)
ddb1Salmo salar DNA damage-binding protein 1 (ddb1), mRNA. (1244 aa)
LOC100194659Salmo salar ubiquitin A-52 residue ribosomal protein fusion product 1like 2 (LOC100194659), mRNA. (128 aa)
LOC106570310Replication protein A 14 kDa subunit-like. (147 aa)
LOC100136537Ubiquitin A-52 residue ribosomal protein fusion product 1like 1. (128 aa)
LOC106573554C-C motif chemokine 21-like. (126 aa)
dpoe4DNA-directed DNA polymerase epsilon 4. (130 aa)
ENSSSAP00000090923annotation not available (91 aa)
pold2DNA polymerase subunit delta-2. (500 aa)
WDR48-2WD repeat-containing protein 48-like isoform X3. (698 aa)
DTLDenticleless protein homolog isoform X1. (660 aa)
cul4bcullin-4B isoform X1; Belongs to the cullin family. (890 aa)
rfc4Replication factor C subunit 4 isoform X1. (361 aa)
rpa3Replication protein A3. (159 aa)
LOC106605109Replication protein A 32 kDa subunit-like. (278 aa)
ENSSSAP00000088520Replication factor C (activator 1) 5. (305 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
rfc5Replication factor C subunit 5. (341 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.