34 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106589948	Fibrous sheath CABYR-binding protein-like isoform X1. (459 aa)
	Plbl1	Phospholipase B-like 1. (184 aa)
	LOC106604416	HRAS-like suppressor 3. (176 aa)
	ENSSSAP00000005633	annotation not available (86 aa)
	LOC106609407	Phospholipase B-like; Putative phospholipase. (597 aa)
	LOC106593742	Phospholipase A(2). (175 aa)
	ENSSSAP00000009185	annotation not available (164 aa)
	ENSSSAP00000009556	annotation not available (55 aa)
	LOC106602299	Group XIIA secretory phospholipase A2-like. (194 aa)
	LOC106599096	Phospholipase A2. (752 aa)
	mboat7	Lysophospholipid acyltransferase 7 isoform X2; Belongs to the membrane-bound acyltransferase family. (475 aa)
	LOC106563359	Phospholipase A(2). (141 aa)
	LOC106601151	Phospholipase A(2). (153 aa)
	jmjd7	Cytosolic phospholipase A2 beta. (330 aa)
	LOC106578797	Uncharacterized protein LOC106578797. (462 aa)
	LOC106610304	Group XIIA secretory phospholipase A2-like isoform X2. (222 aa)
	LOC106575164	Secretory phospholipase A2 receptor-like isoform X1. (1447 aa)
	LOC106577847	Cytosolic phospholipase A2 gamma-like isoform X1. (411 aa)
	ENSSSAP00000047218	annotation not available (499 aa)
	LOC106610307	Group XIIA secretory phospholipase A2-like isoform X1. (148 aa)
	LOC106612085	Retinoic acid receptor responder protein 3-like. (174 aa)
	LOC106574236	Secretory phospholipase A2 receptor-like isoform X1. (1433 aa)
	ENSSSAP00000117406	annotation not available (70 aa)
	LOC106585490	Phospholipase A(2). (216 aa)
	ENSSSAP00000061152	Zgc:92162. (148 aa)
	ENSSSAP00000072316	annotation not available (127 aa)
	LOC106604378	Retinoic acid receptor responder protein 3-like. (174 aa)
	LOC106560559	Phospholipase A2. (754 aa)
	LOC106579941	Phospholipase A(2). (142 aa)
	PLBL1	Phospholipase B-like; Putative phospholipase. (572 aa)
	LOC106563468	HRAS-like suppressor 3. (177 aa)
	LOC106584996	Phospholipase B-like; Putative phospholipase. (549 aa)
	pla2g4f	Phospholipase A2. (796 aa)
	LOC106583972	Phospholipase A2. (749 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000005633	ENSSSAP00000009185	ENSSSAP00000005633	ENSSSAP00000009185	annotation not available	annotation not available	0.543
ENSSSAP00000005633	ENSSSAP00000061152	ENSSSAP00000005633	ENSSSAP00000061152	annotation not available	Zgc:92162.	0.543
ENSSSAP00000005633	LOC106560559	ENSSSAP00000005633	ENSSSAP00000078178	annotation not available	Phospholipase A2.	0.644
ENSSSAP00000005633	LOC106578797	ENSSSAP00000005633	ENSSSAP00000032476	annotation not available	Uncharacterized protein LOC106578797.	0.414
ENSSSAP00000005633	LOC106583972	ENSSSAP00000005633	ENSSSAP00000105394	annotation not available	Phospholipase A2.	0.644
ENSSSAP00000005633	LOC106589948	ENSSSAP00000005633	ENSSSAP00000112654	annotation not available	Fibrous sheath CABYR-binding protein-like isoform X1.	0.414
ENSSSAP00000005633	LOC106593742	ENSSSAP00000005633	ENSSSAP00000006811	annotation not available	Phospholipase A(2).	0.543
ENSSSAP00000005633	LOC106599096	ENSSSAP00000005633	ENSSSAP00000010358	annotation not available	Phospholipase A2.	0.644
ENSSSAP00000005633	LOC106601151	ENSSSAP00000005633	ENSSSAP00000030151	annotation not available	Phospholipase A(2).	0.543
ENSSSAP00000005633	LOC106602299	ENSSSAP00000005633	ENSSSAP00000010078	annotation not available	Group XIIA secretory phospholipase A2-like.	0.438
ENSSSAP00000005633	LOC106610304	ENSSSAP00000005633	ENSSSAP00000044331	annotation not available	Group XIIA secretory phospholipase A2-like isoform X2.	0.438
ENSSSAP00000005633	LOC106610307	ENSSSAP00000005633	ENSSSAP00000048909	annotation not available	Group XIIA secretory phospholipase A2-like isoform X1.	0.438
ENSSSAP00000009185	ENSSSAP00000005633	ENSSSAP00000009185	ENSSSAP00000005633	annotation not available	annotation not available	0.543
ENSSSAP00000009185	ENSSSAP00000117406	ENSSSAP00000009185	ENSSSAP00000117406	annotation not available	annotation not available	0.543
ENSSSAP00000009185	LOC106560559	ENSSSAP00000009185	ENSSSAP00000078178	annotation not available	Phospholipase A2.	0.666
ENSSSAP00000009185	LOC106563359	ENSSSAP00000009185	ENSSSAP00000027607	annotation not available	Phospholipase A(2).	0.573
ENSSSAP00000009185	LOC106583972	ENSSSAP00000009185	ENSSSAP00000105394	annotation not available	Phospholipase A2.	0.666
ENSSSAP00000009185	LOC106585490	ENSSSAP00000009185	ENSSSAP00000055315	annotation not available	Phospholipase A(2).	0.587
ENSSSAP00000009185	LOC106599096	ENSSSAP00000009185	ENSSSAP00000010358	annotation not available	Phospholipase A2.	0.666
ENSSSAP00000009185	LOC106602299	ENSSSAP00000009185	ENSSSAP00000010078	annotation not available	Group XIIA secretory phospholipase A2-like.	0.437