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gar1 gar1 LOC106604513 LOC106604513 pif1 pif1 LOC106579979 LOC106579979 shq1 shq1 DKC1 DKC1 ENSSSAP00000110236 ENSSSAP00000110236 LOC106603897 LOC106603897 cdk2 cdk2 LOC106582316 LOC106582316 ccna2 ccna2 LOC106608819 LOC106608819 ccna1 ccna1 LOC106608852 LOC106608852 ANKRD28 ANKRD28 LOC106611545 LOC106611545 ENSSSAP00000027416 ENSSSAP00000027416 LOC106590870 LOC106590870 PPP6C PPP6C LOC106567178 LOC106567178 LOC106588741 LOC106588741 LOC106577797 LOC106577797 terf1 terf1 ENSSSAP00000040288 ENSSSAP00000040288 ruvbl2 ruvbl2 RBPMS RBPMS ENSSSAP00000049221 ENSSSAP00000049221 ENSSSAP00000049337 ENSSSAP00000049337 ANKRD52 ANKRD52 ANKRD52-2 ANKRD52-2 tert tert LOC106595628 LOC106595628 LOC106572525 LOC106572525 LOC106586375 LOC106586375 LOC106577940 LOC106577940 LOC106595456 LOC106595456 LOC106565436 LOC106565436 ENSSSAP00000070718 ENSSSAP00000070718 ENSSSAP00000070723 ENSSSAP00000070723 LOC106563393 LOC106563393 PPP6C-2 PPP6C-2 WRAP53 WRAP53 rtel1 rtel1 nola2 nola2 LOC106608971 LOC106608971 PPP6C-3 PPP6C-3 pot1 pot1 ankrd66 ankrd66
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (209 aa)
LOC106604513H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (241 aa)
pif1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (650 aa)
LOC106579979Serine/threonine-protein phosphatase. (305 aa)
shq1Protein SHQ1 homolog. (606 aa)
DKC1H/ACA ribonucleoprotein complex subunit 4. (534 aa)
ENSSSAP00000110236annotation not available (65 aa)
LOC106603897Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
cdk2Cell division protein kinase 2; Belongs to the protein kinase superfamily. (298 aa)
LOC106582316Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X6. (1051 aa)
ccna2Cyclin A2. (438 aa)
LOC106608819Telomerase Cajal body protein 1-like. (555 aa)
ccna1cyclin-A1 isoform X2; Belongs to the cyclin family. (405 aa)
LOC106608852Uncharacterized protein LOC106608852. (635 aa)
ANKRD28Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like. (360 aa)
LOC106611545cyclin-A2-like; Belongs to the cyclin family. (431 aa)
ENSSSAP00000027416annotation not available (48 aa)
LOC106590870Probable tRNA pseudouridine synthase 1. (274 aa)
PPP6CSerine/threonine-protein phosphatase. (305 aa)
LOC106567178Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X2. (1043 aa)
LOC106588741Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1. (1102 aa)
LOC106577797Uncharacterized protein LOC106577797 isoform X2. (466 aa)
terf1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (379 aa)
ENSSSAP00000040288annotation not available (282 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (511 aa)
RBPMSRNA-binding protein with multiple splicing isoform X2. (219 aa)
ENSSSAP00000049221annotation not available (48 aa)
ENSSSAP00000049337annotation not available (364 aa)
ANKRD52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X1. (1019 aa)
ANKRD52-2Ankyrin repeat domain 52. (1059 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1151 aa)
LOC106595628Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like. (463 aa)
LOC106572525Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X2. (1068 aa)
LOC106586375Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like isoform X1. (1071 aa)
LOC106577940H/ACA ribonucleoprotein complex subunit 3-like. (64 aa)
LOC106595456Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like. (398 aa)
LOC106565436SAP domain-containing ribonucleoprotein-like isoform X1. (464 aa)
ENSSSAP00000070718annotation not available (323 aa)
ENSSSAP00000070723annotation not available (233 aa)
LOC106563393H/ACA ribonucleoprotein complex subunit 4-like. (500 aa)
PPP6C-2Serine/threonine-protein phosphatase. (306 aa)
WRAP53Telomerase Cajal body protein 1-like. (731 aa)
rtel1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1208 aa)
nola2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
LOC106608971H/ACA ribonucleoprotein complex subunit 3 isoform X2. (64 aa)
PPP6C-3Serine/threonine-protein phosphatase. (305 aa)
pot1Protection of telomeres protein 1 isoform X1. (838 aa)
ankrd66Ankyrin repeat domain-containing protein 66. (157 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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