STRINGSTRING
LOC106601767 LOC106601767 LOC106567693 LOC106567693 LOC106569996 LOC106569996 NUP98 NUP98 LOC106579625 LOC106579625 scmh1 scmh1 nup93 nup93 NUP160 NUP160 LOC106563918 LOC106563918 xpc xpc LOC106589865 LOC106589865 LOC106603451 LOC106603451 ENSSSAP00000077364 ENSSSAP00000077364 nupl2 nupl2 ENSSSAP00000077168 ENSSSAP00000077168 ENSSSAP00000077162 ENSSSAP00000077162 ENSSSAP00000077141 ENSSSAP00000077141 ENSSSAP00000076508 ENSSSAP00000076508 LOC106592735 LOC106592735 LOC106598686 LOC106598686 ENSSSAP00000075469 ENSSSAP00000075469 LOC106589267 LOC106589267 LOC106567029 LOC106567029 LOC106587472 LOC106587472 LOC106613774 LOC106613774 smc5 smc5 sumo3-3 sumo3-3 LOC106575969 LOC106575969 LOC106588438 LOC106588438 LOC106612933 LOC106612933 LOC106607347 LOC106607347 LOC106601101-2 LOC106601101-2 xrcc4 xrcc4 LOC106567227 LOC106567227 LOC106570714 LOC106570714 LOC106563079 LOC106563079 LOC106564893 LOC106564893 LOC106564894 LOC106564894 LOC106594566 LOC106594566 LOC106586530 LOC106586530 ube2i-2 ube2i-2 LOC106578785 LOC106578785 ENSSSAP00000056506 ENSSSAP00000056506 ENSSSAP00000055453 ENSSSAP00000055453 LOC106582182 LOC106582182 parp1 parp1 nup160 nup160 LOC106593143 LOC106593143 LOC106590573 LOC106590573 ENSSSAP00000052702 ENSSSAP00000052702 sumo3-2 sumo3-2 LOC106560708 LOC106560708 rfa1 rfa1 LOC106600883 LOC106600883 LOC106582552 LOC106582552 LOC106568664 LOC106568664 rng2a rng2a ENSSSAP00000047854 ENSSSAP00000047854 ENSSSAP00000047445 ENSSSAP00000047445 LOC106600901 LOC106600901 LOC106587926 LOC106587926 LOC106574244 LOC106574244 ENSSSAP00000045345 ENSSSAP00000045345 nup188 nup188 cbx8 cbx8 LOC106588430 LOC106588430 LOC106564949 LOC106564949 ENSSSAP00000041843 ENSSSAP00000041843 ENSSSAP00000041823 ENSSSAP00000041823 nup37 nup37 LOC106579288 LOC106579288 ube2i ube2i LOC106606687 LOC106606687 tro tro seh1l seh1l sumo3 sumo3 LOC106601101 LOC106601101 LOC106601110 LOC106601110 LOC106587120 LOC106587120 LOC106606151 LOC106606151 ENSSSAP00000031689 ENSSSAP00000031689 LOC106573320 LOC106573320 LOC106584135 LOC106584135 SUMO1 SUMO1 RAE1 RAE1 ENSSSAP00000030199 ENSSSAP00000030199 ENSSSAP00000029344 ENSSSAP00000029344 LOC106561087 LOC106561087 ENSSSAP00000028424 ENSSSAP00000028424 ENSSSAP00000028313 ENSSSAP00000028313 smc6 smc6 recql4 recql4 ENSSSAP00000026070 ENSSSAP00000026070 ENSSSAP00000025737 ENSSSAP00000025737 LOC106605400 LOC106605400 ENSSSAP00000023889 ENSSSAP00000023889 LOC106560285 LOC106560285 ENSSSAP00000021974 ENSSSAP00000021974 ENSSSAP00000021767 ENSSSAP00000021767 LOC106591976 LOC106591976 ENSSSAP00000021461 ENSSSAP00000021461 LOC106566759 LOC106566759 LOC106606673 LOC106606673 LOC106592056 LOC106592056 LOC106584429 LOC106584429 ENSSSAP00000019926 ENSSSAP00000019926 LOC106584662 LOC106584662 LOC106584663 LOC106584663 LOC106586901 LOC106586901 LOC106605922 LOC106605922 LOC106572714 LOC106572714 LOC106601802-3 LOC106601802-3 LOC106599100 LOC106599100 LOC106564728 LOC106564728 LOC106571901 LOC106571901 ENSSSAP00000015648 ENSSSAP00000015648 LOC106564479 LOC106564479 ENSSSAP00000014142 ENSSSAP00000014142 LOC106601802-2 LOC106601802-2 NUP85 NUP85 LOC106603439 LOC106603439 meiob meiob LOC106604493 LOC106604493 rae1 rae1 ENSSSAP00000007329 ENSSSAP00000007329 LOC106605834 LOC106605834 LOC106604590 LOC106604590 ENSSSAP00000005859 ENSSSAP00000005859 ENSSSAP00000005784 ENSSSAP00000005784 LOC106606958 LOC106606958 LOC106606946 LOC106606946 LOC106607450 LOC106607450 RNF2 RNF2 nup85 nup85 LOC106601802 LOC106601802 LOC106612095 LOC106612095 LOC106607749 LOC106607749 ENSSSAP00000120874 ENSSSAP00000120874 LOC106589957 LOC106589957 bmi1a bmi1a LOC106567908 LOC106567908 RING1 RING1 LOC106574529 LOC106574529 LOC106583010 LOC106583010 blm blm nup58 nup58 LOC106588509 LOC106588509 rad52 rad52 LOC106575446 LOC106575446 brca1 brca1 aaas aaas LOC106564670 LOC106564670 LOC106604302 LOC106604302 ENSSSAP00000103316 ENSSSAP00000103316 ENSSSAP00000101867 ENSSSAP00000101867 LOC106580672 LOC106580672 ENSSSAP00000100747 ENSSSAP00000100747 LOC106571302 LOC106571302 cetn3 cetn3 nup205 nup205 LOC106611344 LOC106611344 cetn1 cetn1 LOC106582498 LOC106582498 LOC106603378 LOC106603378 LOC106585761 LOC106585761 smo3b smo3b LOC106580664 LOC106580664 LOC106569745 LOC106569745 LOC106578384 LOC106578384 ENSSSAP00000091078 ENSSSAP00000091078 LOC106572450 LOC106572450 ENSSSAP00000089632 ENSSSAP00000089632 RANBP2 RANBP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106601767Chromobox protein homolog 8-like. (348 aa)
LOC106567693Nuclear envelope pore membrane protein POM 121-like isoform X2. (1303 aa)
LOC106569996Polyhomeotic-like protein 1 isoform X1. (901 aa)
NUP98Nuclear pore complex protein Nup98-Nup96-like isoform X1. (1814 aa)
LOC106579625Mediator of DNA damage checkpoint protein 1-like. (2327 aa)
scmh1Polycomb protein SCMH1 isoform X1. (719 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (884 aa)
NUP160Nuclear pore complex protein Nup160-like isoform X1. (1412 aa)
LOC106563918Nuclear pore complex protein Nup155-like isoform X1. (1340 aa)
xpcDNA repair protein complementing XP-C cells. (905 aa)
LOC106589865Chromobox protein homolog 2-like. (640 aa)
LOC106603451Nuclear pore complex protein Nup88-like isoform X1. (723 aa)
ENSSSAP00000077364annotation not available (399 aa)
nupl2Nucleoporin-like protein 2. (444 aa)
ENSSSAP00000077168annotation not available (218 aa)
ENSSSAP00000077162annotation not available (216 aa)
ENSSSAP00000077141annotation not available (211 aa)
ENSSSAP00000076508annotation not available (188 aa)
LOC106592735Small ubiquitin-related modifier 2-like. (52 aa)
LOC106598686Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (667 aa)
ENSSSAP00000075469Nucleoporin seh1-like. (189 aa)
LOC106589267BTB/POZ domain-containing protein KCTD5-like. (268 aa)
LOC106567029Structural maintenance of chromosomes protein. (1232 aa)
LOC106587472Nuclear pore complex protein Nup133-like. (1147 aa)
LOC106613774E3 SUMO-protein ligase PIAS4-like isoform X1. (493 aa)
smc5Structural maintenance of chromosomes protein 5 isoform X1. (1076 aa)
sumo3-3SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae). (113 aa)
LOC106575969Sex comb on midleg-like protein 2 isoform X2. (449 aa)
LOC106588438Polyhomeotic-like protein 1 isoform X3. (900 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
LOC106607347Non-structural maintenance of chromosomes element 1 homolog isoform X1. (274 aa)
LOC106601101-2SUMO-conjugating enzyme UBC9-B. (200 aa)
xrcc4DNA repair protein XRCC4 isoform X2. (336 aa)
LOC106567227Double-strand-break repair protein rad21 homolog. (542 aa)
LOC106570714Nucleoporin-like protein 2. (387 aa)
LOC106563079Centrin-3. (167 aa)
LOC106564893E3 SUMO-protein ligase CBX4-like. (546 aa)
LOC106564894Chromobox protein homolog 8-like. (399 aa)
LOC106594566Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (312 aa)
LOC106586530E3 SUMO-protein ligase RanBP2-like isoform X1. (3222 aa)
ube2i-2SUMO-conjugating enzyme UBC9 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
LOC106578785Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (454 aa)
ENSSSAP00000056506annotation not available (105 aa)
ENSSSAP00000055453annotation not available (138 aa)
LOC106582182E3 SUMO-protein ligase RanBP2-like isoform X4. (3359 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1030 aa)
nup160Nuclear pore complex protein Nup160. (1391 aa)
LOC106593143Melanoma-associated antigen G1-like isoform X1. (201 aa)
LOC106590573Nucleoporin p58/p45-like isoform X1. (573 aa)
ENSSSAP00000052702Nucleoporin 37. (247 aa)
sumo3-2Small ubiquitin like modifier 3. (170 aa)
LOC106560708Sex comb on midleg-like protein 2 isoform X1. (706 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
LOC106600883SUMO-conjugating enzyme UBC9-like. (171 aa)
LOC106582552Small ubiquitin-related modifier. (101 aa)
LOC106568664Polycomb complex protein BMI-1-B-like isoform X1. (320 aa)
rng2aE3 ubiquitin-protein ligase RING2-A. (387 aa)
ENSSSAP00000047854annotation not available (265 aa)
ENSSSAP00000047445annotation not available (282 aa)
LOC106600901Nuclear body protein SP140-like isoform X2. (357 aa)
LOC106587926Polycomb complex protein BMI-1-like. (333 aa)
LOC106574244Small ubiquitin-related modifier. (101 aa)
ENSSSAP00000045345annotation not available (48 aa)
nup188Nucleoporin NUP188 homolog. (1736 aa)
cbx8Chromobox protein homolog 8. (437 aa)
LOC106588430E3 SUMO-protein ligase CBX4-like. (563 aa)
LOC106564949Polycomb complex protein BMI-1-like. (333 aa)
ENSSSAP00000041843annotation not available (108 aa)
ENSSSAP00000041823Ring finger protein 169. (501 aa)
nup37Nucleoporin Nup37 isoform X4. (362 aa)
LOC106579288BTB/POZ domain-containing protein KCTD5-like. (297 aa)
ube2iSUMO-conjugating enzyme UBC9-B-like. (171 aa)
LOC106606687E3 SUMO-protein ligase CBX4-like. (595 aa)
troTrophinin. (103 aa)
seh1lNucleoporin SEH1 isoform X4; Belongs to the WD repeat SEC13 family. (402 aa)
sumo3Small ubiquitin-related modifier. (113 aa)
LOC106601101SUMO-conjugating enzyme UBC9-B isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
LOC106601110Non-structural maintenance of chromosomes element 1 homolog. (274 aa)
LOC106587120Small ubiquitin-related modifier. (96 aa)
LOC106606151E3 SUMO-protein ligase NSE2-like. (240 aa)
ENSSSAP00000031689annotation not available (54 aa)
LOC106573320Double-strand-break repair protein rad21 homolog. (128 aa)
LOC106584135Nucleoprotein TPR-like isoform X2. (2280 aa)
SUMO1Small Ubiquitin-related modifier 1. (101 aa)
RAE1mRNA export factor isoform X2. (365 aa)
ENSSSAP00000030199annotation not available (162 aa)
ENSSSAP00000029344annotation not available (609 aa)
LOC106561087G/T mismatch-specific thymine DNA glycosylase-like isoform X1. (467 aa)
ENSSSAP00000028424Cohesin subunit SA-1-like. (69 aa)
ENSSSAP00000028313annotation not available (114 aa)
smc6Structural maintenance of chromosomes protein 6 isoform X1. (1090 aa)
recql4ATP-dependent DNA helicase Q4. (1404 aa)
ENSSSAP00000026070Structural maintenance of chromosomes 3. (1217 aa)
ENSSSAP00000025737annotation not available (187 aa)
LOC106605400Mediator of DNA damage checkpoint protein 1-like. (2157 aa)
ENSSSAP00000023889annotation not available (69 aa)
LOC106560285Nucleoprotein TPR-like isoform X6. (2395 aa)
ENSSSAP00000021974annotation not available (69 aa)
ENSSSAP00000021767annotation not available (69 aa)
LOC106591976Nuclear pore complex protein Nup50-like. (374 aa)
ENSSSAP00000021461annotation not available (590 aa)
LOC106566759Nuclear pore membrane glycoprotein 210-like isoform X1. (1870 aa)
LOC106606673Chromobox protein homolog 8-like isoform X1. (465 aa)
LOC106592056Sex comb on midleg-like protein 2. (119 aa)
LOC106584429E3 SUMO-protein ligase PIAS4-like. (497 aa)
ENSSSAP00000019926annotation not available (202 aa)
LOC106584662G/T mismatch-specific thymine DNA glycosylase-like isoform X1. (436 aa)
LOC106584663G/T mismatch-specific thymine DNA glycosylase-like isoform X1. (457 aa)
LOC106586901Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (309 aa)
LOC106605922Nuclear pore membrane glycoprotein 210-like isoform X1. (632 aa)
LOC106572714Structural maintenance of chromosomes protein. (1241 aa)
LOC106601802-3Small ubiquitin-related modifier 2. (95 aa)
LOC106599100Nucleoprotein TPR-like isoform X1. (2610 aa)
LOC106564728Nuclear pore complex protein Nup133-like. (1145 aa)
LOC106571901Nuclear pore membrane glycoprotein 210-like. (1897 aa)
ENSSSAP00000015648Polyhomeotic homolog 1. (759 aa)
LOC106564479Structural maintenance of chromosomes protein. (1217 aa)
ENSSSAP00000014142Nuclear pore complex protein Nup88-like. (760 aa)
LOC106601802-2Small ubiquitin-related modifier 2. (108 aa)
NUP85Nucleoporin 85. (740 aa)
LOC106603439Nuclear envelope pore membrane protein POM 121-like. (1166 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
LOC106604493Cohesin subunit SA-2-like isoform X2. (1003 aa)
rae1Salmo salar mRNA export factor (rae1l), mRNA. (382 aa)
ENSSSAP00000007329annotation not available (312 aa)
LOC106605834Polyhomeotic-like protein 1 isoform X2. (832 aa)
LOC106604590Caltractin-like. (171 aa)
ENSSSAP00000005859annotation not available (69 aa)
ENSSSAP00000005784Double-strand-break repair protein rad21 homolog. (515 aa)
LOC106606958Chromobox protein homolog 2-like. (564 aa)
LOC106606946Chromobox protein homolog 2-like. (563 aa)
LOC106607450SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
RNF2E3 ubiquitin-protein ligase RING2-like isoform X1. (223 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
LOC106601802Small ubiquitin-related modifier. (95 aa)
LOC106612095Chromobox protein homolog 2-like. (629 aa)
LOC106607749Nucleoporin Nup43-like. (373 aa)
ENSSSAP00000120874Structural maintenance of chromosomes 5. (734 aa)
LOC106589957Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (525 aa)
bmi1aPolycomb complex protein BMI-1-A isoform X1. (363 aa)
LOC106567908Nuclear pore complex protein Nup98-Nup96-like isoform X1. (1827 aa)
RING1E3 ubiquitin-protein ligase RING2-A-like isoform X2. (428 aa)
LOC106574529Small ubiquitin-related modifier. (94 aa)
LOC106583010Polyhomeotic-like protein 2 isoform X5. (894 aa)
blmBloom syndrome protein isoform X1. (1471 aa)
nup58Nucleoporin p58/p45 isoform X1. (625 aa)
LOC106588509Double-strand-break repair protein rad21 homolog. (641 aa)
rad52DNA repair protein RAD52 homolog. (448 aa)
LOC106575446Cohesin subunit SA-1. (1419 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
aaasAladin. (514 aa)
LOC106564670Small ubiquitin-related modifier. (96 aa)
LOC106604302Cohesin subunit SA-2-like. (1285 aa)
ENSSSAP00000103316annotation not available (69 aa)
ENSSSAP00000101867annotation not available (110 aa)
LOC106580672E3 ubiquitin-protein ligase RNF169-like. (544 aa)
ENSSSAP00000100747annotation not available (142 aa)
LOC106571302Nucleoporin Nup43-like. (373 aa)
cetn3Centrin 3. (169 aa)
nup205Nuclear pore complex protein Nup205. (1988 aa)
LOC106611344Structural maintenance of chromosomes protein 6-like. (1102 aa)
cetn1Centrin-1. (172 aa)
LOC106582498Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (310 aa)
LOC106603378Cohesin subunit SA-2 isoform X1. (1272 aa)
LOC106585761DNA repair protein XRCC4-like isoform X1. (317 aa)
smo3bSmall ubiquitin-related modifier 2 isoform X2. (164 aa)
LOC106580664E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (557 aa)
LOC106569745E3 ubiquitin-protein ligase RING2. (283 aa)
LOC106578384Polycomb complex protein BMI-1-A-like. (329 aa)
ENSSSAP00000091078annotation not available (102 aa)
LOC106572450Double-strand-break repair protein rad21 homolog isoform X1. (556 aa)
ENSSSAP00000089632Stromal antigen 2a. (1256 aa)
RANBP2E3 SUMO-protein ligase RanBP2-like. (3359 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]