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LOC106582890 LOC106582890 LOC106601802 LOC106601802 nup85 nup85 LOC106609338 LOC106609338 LOC106607450 LOC106607450 rgp1 rgp1 rae1 rae1 top1 top1 NU107 NU107 LOC106603439 LOC106603439 ENSSSAP00000011377 ENSSSAP00000011377 NUP85 NUP85 LOC106601802-2 LOC106601802-2 LOC106572692 LOC106572692 LOC106605894 LOC106605894 LOC106603332 LOC106603332 ENSSSAP00000014142 ENSSSAP00000014142 LOC106571901 LOC106571901 LOC106564728 LOC106564728 LOC106599100 LOC106599100 LOC106601802-3 LOC106601802-3 ENSSSAP00000016336 ENSSSAP00000016336 nup62 nup62 birc5 birc5 LOC106605922 LOC106605922 LOC106565779 LOC106565779 LOC106573105 LOC106573105 PCNA PCNA LOC106586901 LOC106586901 ENSSSAP00000019392 ENSSSAP00000019392 LOC106562666 LOC106562666 LOC106584429 LOC106584429 LOC106566759 LOC106566759 LOC106591976 LOC106591976 ENSSSAP00000023063 ENSSSAP00000023063 LOC106560285 LOC106560285 ENSSSAP00000025737 ENSSSAP00000025737 nup54 nup54 ENSSSAP00000028313 ENSSSAP00000028313 ENSSSAP00000028410 ENSSSAP00000028410 RAE1 RAE1 SUMO1 SUMO1 LOC106584135 LOC106584135 ENSSSAP00000031689 ENSSSAP00000031689 LOC106587120 LOC106587120 LOC106570039 LOC106570039 LOC106601101 LOC106601101 sumo3 sumo3 seh1l seh1l ube2i ube2i INCEB INCEB LOC106579288 LOC106579288 nup37 nup37 nup188 nup188 LOC106574244 LOC106574244 LOC106588909 LOC106588909 ENSSSAP00000046621 ENSSSAP00000046621 LOC106595056 LOC106595056 Pias1 Pias1 LOC106582552 LOC106582552 LOC106560872 LOC106560872 LOC106600883 LOC106600883 sumo3-2 sumo3-2 ENSSSAP00000052702 ENSSSAP00000052702 LOC106590573 LOC106590573 nup160 nup160 LOC106582182 LOC106582182 ENSSSAP00000056506 ENSSSAP00000056506 ube2i-2 ube2i-2 LOC106586530 LOC106586530 LOC106594566 LOC106594566 LOC106570714 LOC106570714 LOC106601101-2 LOC106601101-2 NUP214 NUP214 nup153 nup153 ENSSSAP00000065248 ENSSSAP00000065248 sumo3-3 sumo3-3 LOC106580445 LOC106580445 LOC106613774 LOC106613774 ENSSSAP00000068940 ENSSSAP00000068940 LOC106561604 LOC106561604 LOC106587472 LOC106587472 LOC106589267 LOC106589267 ENSSSAP00000075469 ENSSSAP00000075469 LOC106598686 LOC106598686 LOC106592735 LOC106592735 ENSSSAP00000077141 ENSSSAP00000077141 ENSSSAP00000077162 ENSSSAP00000077162 ENSSSAP00000077168 ENSSSAP00000077168 nupl2 nupl2 ENSSSAP00000077364 ENSSSAP00000077364 LOC106603451 LOC106603451 LOC106607164 LOC106607164 LOC106563918 LOC106563918 NUP160 NUP160 nup93 nup93 LOC106570304 LOC106570304 LOC106588671 LOC106588671 ENSSSAP00000085397 ENSSSAP00000085397 NUP98 NUP98 LOC106567693 LOC106567693 ENSSSAP00000088012 ENSSSAP00000088012 LOC106607749 LOC106607749 RANBP2 RANBP2 LOC106561869 LOC106561869 ENSSSAP00000091078 ENSSSAP00000091078 top2a top2a smo3b smo3b LOC106582498 LOC106582498 LOC106584817 LOC106584817 LOC106584818 LOC106584818 nup205 nup205 LOC106571302 LOC106571302 LOC106564670 LOC106564670 aaas aaas LOC106579647 LOC106579647 nup58 nup58 ndc1 ndc1 borea borea LOC106574529 LOC106574529 LOC106567908 LOC106567908
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
LOC106582890DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (746 aa)
LOC106601802Small ubiquitin-related modifier. (95 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (651 aa)
LOC106609338Ran GTPase-activating protein 1-like. (562 aa)
LOC106607450SUMO-conjugating enzyme UBC9-like; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
rgp1Retrograde Golgi transport protein RGP1 homolog. (628 aa)
rae1Salmo salar mRNA export factor (rae1l), mRNA. (382 aa)
top1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (730 aa)
NU107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (631 aa)
LOC106603439Nuclear envelope pore membrane protein POM 121-like. (1166 aa)
ENSSSAP00000011377annotation not available (623 aa)
NUP85Nucleoporin 85. (740 aa)
LOC106601802-2Small ubiquitin-related modifier 2. (108 aa)
LOC106572692Baculoviral IAP repeat-containing protein 5.1-A-like isoform X2. (146 aa)
LOC106605894Nuclear pore membrane glycoprotein 210-like. (208 aa)
LOC106603332Nuclear pore glycoprotein p62-like isoform X1. (546 aa)
ENSSSAP00000014142Nuclear pore complex protein Nup88-like. (760 aa)
LOC106571901Nuclear pore membrane glycoprotein 210-like. (1897 aa)
LOC106564728Nuclear pore complex protein Nup133-like. (1145 aa)
LOC106599100Nucleoprotein TPR-like isoform X1. (2610 aa)
LOC106601802-3Small ubiquitin-related modifier 2. (95 aa)
ENSSSAP00000016336annotation not available (155 aa)
nup62Nuclear pore glycoprotein p62. (579 aa)
birc5Baculoviral IAP repeat-containing protein 5. (142 aa)
LOC106605922Nuclear pore membrane glycoprotein 210-like isoform X1. (632 aa)
LOC106565779DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (754 aa)
LOC106573105Aurora kinase B-like; Belongs to the protein kinase superfamily. (335 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC106586901Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (309 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
LOC106562666E3 SUMO-protein ligase PIAS1-like isoform X1. (108 aa)
LOC106584429E3 SUMO-protein ligase PIAS4-like. (497 aa)
LOC106566759Nuclear pore membrane glycoprotein 210-like isoform X1. (1870 aa)
LOC106591976Nuclear pore complex protein Nup50-like. (374 aa)
ENSSSAP00000023063E3 SUMO-protein ligase PIAS1-like. (194 aa)
LOC106560285Nucleoprotein TPR-like isoform X6. (2395 aa)
ENSSSAP00000025737annotation not available (187 aa)
nup54Nucleoporin p54. (534 aa)
ENSSSAP00000028313annotation not available (114 aa)
ENSSSAP00000028410annotation not available (481 aa)
RAE1mRNA export factor isoform X2. (365 aa)
SUMO1Small Ubiquitin-related modifier 1. (101 aa)
LOC106584135Nucleoprotein TPR-like isoform X2. (2280 aa)
ENSSSAP00000031689annotation not available (54 aa)
LOC106587120Small ubiquitin-related modifier. (96 aa)
LOC106570039Borealin-like isoform X1. (328 aa)
LOC106601101SUMO-conjugating enzyme UBC9-B isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
sumo3Small ubiquitin-related modifier. (113 aa)
seh1lNucleoporin SEH1 isoform X4; Belongs to the WD repeat SEC13 family. (402 aa)
ube2iSUMO-conjugating enzyme UBC9-B-like. (171 aa)
INCEBInner centromere protein B. (820 aa)
LOC106579288BTB/POZ domain-containing protein KCTD5-like. (297 aa)
nup37Nucleoporin Nup37 isoform X4. (362 aa)
nup188Nucleoporin NUP188 homolog. (1736 aa)
LOC106574244Small ubiquitin-related modifier. (101 aa)
LOC106588909Nuclear pore complex protein Nup153-like isoform X1. (1406 aa)
ENSSSAP00000046621annotation not available (111 aa)
LOC106595056Gastrula zinc finger protein XlCGF17.1-like. (209 aa)
Pias1Protein inhibitor of activated STAT 1. (425 aa)
LOC106582552Small ubiquitin-related modifier. (101 aa)
LOC106560872DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (753 aa)
LOC106600883SUMO-conjugating enzyme UBC9-like. (171 aa)
sumo3-2Small ubiquitin like modifier 3. (170 aa)
ENSSSAP00000052702Nucleoporin 37. (247 aa)
LOC106590573Nucleoporin p58/p45-like isoform X1. (573 aa)
nup160Nuclear pore complex protein Nup160. (1391 aa)
LOC106582182E3 SUMO-protein ligase RanBP2-like isoform X4. (3359 aa)
ENSSSAP00000056506annotation not available (105 aa)
ube2i-2SUMO-conjugating enzyme UBC9 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
LOC106586530E3 SUMO-protein ligase RanBP2-like isoform X1. (3222 aa)
LOC106594566Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (312 aa)
LOC106570714Nucleoporin-like protein 2. (387 aa)
LOC106601101-2SUMO-conjugating enzyme UBC9-B. (200 aa)
NUP214Nuclear pore complex protein Nup214-like isoform X2. (2022 aa)
nup153Nuclear pore complex protein Nup153 isoform X1. (1479 aa)
ENSSSAP00000065248annotation not available (188 aa)
sumo3-3SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae). (113 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC106613774E3 SUMO-protein ligase PIAS4-like isoform X1. (493 aa)
ENSSSAP00000068940annotation not available (194 aa)
LOC106561604Aurora kinase B-like; Belongs to the protein kinase superfamily. (334 aa)
LOC106587472Nuclear pore complex protein Nup133-like. (1147 aa)
LOC106589267BTB/POZ domain-containing protein KCTD5-like. (268 aa)
ENSSSAP00000075469Nucleoporin seh1-like. (189 aa)
LOC106598686Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (667 aa)
LOC106592735Small ubiquitin-related modifier 2-like. (52 aa)
ENSSSAP00000077141annotation not available (211 aa)
ENSSSAP00000077162annotation not available (216 aa)
ENSSSAP00000077168annotation not available (218 aa)
nupl2Nucleoporin-like protein 2. (444 aa)
ENSSSAP00000077364annotation not available (399 aa)
LOC106603451Nuclear pore complex protein Nup88-like isoform X1. (723 aa)
LOC106607164Ran GTPase-activating protein 1-like isoform X2. (593 aa)
LOC106563918Nuclear pore complex protein Nup155-like isoform X1. (1340 aa)
NUP160Nuclear pore complex protein Nup160-like isoform X1. (1412 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (884 aa)
LOC106570304DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1655 aa)
LOC106588671DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1657 aa)
ENSSSAP00000085397Baculoviral IAP repeat containing 5b. (128 aa)
NUP98Nuclear pore complex protein Nup98-Nup96-like isoform X1. (1814 aa)
LOC106567693Nuclear envelope pore membrane protein POM 121-like isoform X2. (1303 aa)
ENSSSAP00000088012annotation not available (536 aa)
LOC106607749Nucleoporin Nup43-like. (373 aa)
RANBP2E3 SUMO-protein ligase RanBP2-like. (3359 aa)
LOC106561869E3 SUMO-protein ligase PIAS1-like isoform X1. (166 aa)
ENSSSAP00000091078annotation not available (102 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1560 aa)
smo3bSmall ubiquitin-related modifier 2 isoform X2. (164 aa)
LOC106582498Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (310 aa)
LOC106584817E3 SUMO-protein ligase PIAS1-like. (556 aa)
LOC106584818E3 SUMO-protein ligase PIAS1-like. (158 aa)
nup205Nuclear pore complex protein Nup205. (1988 aa)
LOC106571302Nucleoporin Nup43-like. (373 aa)
LOC106564670Small ubiquitin-related modifier. (96 aa)
aaasAladin. (514 aa)
LOC106579647DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (847 aa)
nup58Nucleoporin p58/p45 isoform X1. (625 aa)
ndc1Nucleoporin NDC1 isoform X1. (670 aa)
boreaBorealin. (292 aa)
LOC106574529Small ubiquitin-related modifier. (94 aa)
LOC106567908Nuclear pore complex protein Nup98-Nup96-like isoform X1. (1827 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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