STRINGSTRING
msh2 msh2 ENSSSAP00000102908 ENSSSAP00000102908 lig1 lig1 rpa2 rpa2 rfa1 rfa1 ENSSSAP00000047854 ENSSSAP00000047854 DPOD1 DPOD1 LOC106601920 LOC106601920 LOC106584876 LOC106584876 ENSSSAP00000019926 ENSSSAP00000019926 meiob meiob pold3 pold3 pold4 pold4 LOC106588659 LOC106588659 LOC106612933 LOC106612933 LOC106605109 LOC106605109 rpa3 rpa3 LOC106570310 LOC106570310 pold2 pold2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (928 aa)
ENSSSAP00000102908annotation not available (83 aa)
lig1DNA ligase. (1088 aa)
rpa2Replication protein A 32 kDa subunit. (278 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
ENSSSAP00000047854annotation not available (265 aa)
DPOD1DNA polymerase. (899 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
LOC106584876Uncharacterized protein LOC106584876. (1240 aa)
ENSSSAP00000019926annotation not available (202 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
pold3DNA polymerase delta subunit 3 isoform X1. (449 aa)
pold4DNA polymerase subunit delta-4. (125 aa)
LOC106588659Replication protein A 32 kDa subunit-A-like isoform X1. (266 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
LOC106605109Replication protein A 32 kDa subunit-like. (278 aa)
rpa3Replication protein A3. (159 aa)
LOC106570310Replication protein A 14 kDa subunit-like. (147 aa)
pold2DNA polymerase subunit delta-2. (500 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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