44 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hmgb1	High mobility group protein B1 isoform X1. (203 aa)
	ENSSSAP00000003228	annotation not available (187 aa)
	LOC106606044	Non-syndromic hearing impairment protein 5-like. (298 aa)
	LOC106575904-2	Charged multivesicular body protein 2b-like. (193 aa)
	hmgb1-2	High mobility group-T protein. (345 aa)
	LOC106575069	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	LOC106586897	Mast cell protease 1A-like. (263 aa)
	LOC106595942	Granzyme-like protein 1. (257 aa)
	LOC106601126	Apoptosis regulator BAX-like. (225 aa)
	LOC106575904	Charged multivesicular body protein 2b-like. (270 aa)
	LOC106612439	High mobility group-T protein-like isoform X2. (196 aa)
	IRF2	Interferon regulatory factor. (345 aa)
	LOC106570815	Interleukin-1. (263 aa)
	LOC100136449	Interleukin-1. (260 aa)
	LOC106592104	Non-syndromic hearing impairment protein 5 homolog. (279 aa)
	LOC106586880	Mast cell protease 1A-like. (242 aa)
	ENSSSAP00000052776	annotation not available (100 aa)
	LOC106586879	Mast cell protease 1A-like. (295 aa)
	LOC106586877	Granzyme-like protein 1. (261 aa)
	LOC106588840	Cytochrome c iso-1/iso-2-like; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	ENSSSAP00000054155	annotation not available (186 aa)
	LOC106587134	Apoptosis regulator BAX-like. (204 aa)
	LOC106588856	Non-syndromic hearing impairment protein 5-like isoform X1. (492 aa)
	CHMP2B	Charged multivesicular body protein 2b-like. (200 aa)
	LOC106582169	Charged multivesicular body protein 2b. (214 aa)
	irf1	Interferon regulatory factor. (334 aa)
	ENSSSAP00000065213	annotation not available (132 aa)
	ENSSSAP00000067658	annotation not available (174 aa)
	ENSSSAP00000067693	annotation not available (154 aa)
	LOC106589838	Inhibitor of apoptosis protein-like isoform X2. (93 aa)
	LOC106607328	Apoptosis regulator BAX-like. (194 aa)
	ENSSSAP00000073552	annotation not available (175 aa)
	LOC106570543	Uncharacterized protein LOC106570543. (231 aa)
	mgdp1	Magnesium-dependent phosphatase 1 isoform X1. (163 aa)
	LOC106570529	Non-syndromic hearing impairment protein 5-like. (494 aa)
	irf1-2	Interferon regulatory factor. (332 aa)
	il18	Interleukin-18. (199 aa)
	LOC106586251	Cytochrome C; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (108 aa)
	LOC106580642	High mobility group-T protein-like isoform X1. (205 aa)
	CHMP2B-2	Charged multivesicular body protein 2b. (229 aa)
	LOC106582467	Cytochrome c-like; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	irf2	Interferon regulatory factor. (346 aa)
	ENSSSAP00000114839	annotation not available (111 aa)
	LOC106561972	Apoptosis regulator BAX-like. (204 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP2B	ENSSSAP00000114839	ENSSSAP00000055492	ENSSSAP00000114839	Charged multivesicular body protein 2b-like.	annotation not available	0.502
CHMP2B	mgdp1	ENSSSAP00000055492	ENSSSAP00000078469	Charged multivesicular body protein 2b-like.	Magnesium-dependent phosphatase 1 isoform X1.	0.502
CHMP2B-2	ENSSSAP00000114839	ENSSSAP00000089504	ENSSSAP00000114839	Charged multivesicular body protein 2b.	annotation not available	0.502
CHMP2B-2	mgdp1	ENSSSAP00000089504	ENSSSAP00000078469	Charged multivesicular body protein 2b.	Magnesium-dependent phosphatase 1 isoform X1.	0.502
ENSSSAP00000003228	ENSSSAP00000054155	ENSSSAP00000003228	ENSSSAP00000054155	annotation not available	annotation not available	0.450
ENSSSAP00000003228	ENSSSAP00000073552	ENSSSAP00000003228	ENSSSAP00000073552	annotation not available	annotation not available	0.730
ENSSSAP00000003228	LOC106570543	ENSSSAP00000003228	ENSSSAP00000074498	annotation not available	Uncharacterized protein LOC106570543.	0.450
ENSSSAP00000003228	LOC106575069	ENSSSAP00000003228	ENSSSAP00000014854	annotation not available	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.645
ENSSSAP00000003228	LOC106582467	ENSSSAP00000003228	ENSSSAP00000090105	annotation not available	Cytochrome c-like; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.645
ENSSSAP00000003228	LOC106586251	ENSSSAP00000003228	ENSSSAP00000088723	annotation not available	Cytochrome C; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.645
ENSSSAP00000003228	LOC106588840	ENSSSAP00000003228	ENSSSAP00000054138	annotation not available	Cytochrome c iso-1/iso-2-like; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.645
ENSSSAP00000003228	LOC106601126	ENSSSAP00000003228	ENSSSAP00000025308	annotation not available	Apoptosis regulator BAX-like.	0.745
ENSSSAP00000003228	LOC106607328	ENSSSAP00000003228	ENSSSAP00000073537	annotation not available	Apoptosis regulator BAX-like.	0.746
ENSSSAP00000054155	ENSSSAP00000003228	ENSSSAP00000054155	ENSSSAP00000003228	annotation not available	annotation not available	0.450
ENSSSAP00000054155	ENSSSAP00000067658	ENSSSAP00000054155	ENSSSAP00000067658	annotation not available	annotation not available	0.450
ENSSSAP00000054155	ENSSSAP00000067693	ENSSSAP00000054155	ENSSSAP00000067693	annotation not available	annotation not available	0.450
ENSSSAP00000054155	ENSSSAP00000073552	ENSSSAP00000054155	ENSSSAP00000073552	annotation not available	annotation not available	0.450
ENSSSAP00000054155	LOC106561972	ENSSSAP00000054155	ENSSSAP00000115522	annotation not available	Apoptosis regulator BAX-like.	0.450
ENSSSAP00000054155	LOC106570529	ENSSSAP00000054155	ENSSSAP00000082335	annotation not available	Non-syndromic hearing impairment protein 5-like.	0.498
ENSSSAP00000054155	LOC106587134	ENSSSAP00000054155	ENSSSAP00000054624	annotation not available	Apoptosis regulator BAX-like.	0.450