STRINGSTRING
exd2 exd2 rfc3 rfc3 LOC106607888 LOC106607888 meiob meiob LOC106563454 LOC106563454 rfc2 rfc2 RCBTB1 RCBTB1 LOC106575945 LOC106575945 LOC106576420 LOC106576420 slf1 slf1 ENSSSAP00000019926 ENSSSAP00000019926 cl032 cl032 LOC106591874 LOC106591874 LOC106574987 LOC106574987 LOC106574988 LOC106574988 ENSSSAP00000025751 ENSSSAP00000025751 recql4 recql4 ENSSSAP00000027284 ENSSSAP00000027284 cp075-2 cp075-2 rad17 rad17 wrn wrn ENSSSAP00000039085 ENSSSAP00000039085 LOC106566947 LOC106566947 rad51 rad51 atm atm ENSSSAP00000047854 ENSSSAP00000047854 rfa1 rfa1 rpa2 rpa2 LOC106563284 LOC106563284 LOC106570830 LOC106570830 rad9a rad9a LOC106588659 LOC106588659 LOC106607343 LOC106607343 LOC106574681 LOC106574681 LOC106612933 LOC106612933 ENSSSAP00000062721 ENSSSAP00000062721 RAD1 RAD1 LOC106603125 LOC106603125 ENSSSAP00000067401 ENSSSAP00000067401 MRE11 MRE11 rcbtb2 rcbtb2 atr atr Mre11 Mre11 ankrd12 ankrd12 LOC106590185 LOC106590185 LOC106592742 LOC106592742 ENSSSAP00000079200 ENSSSAP00000079200 ENSSSAP00000079966 ENSSSAP00000079966 DNA2 DNA2 ENSSSAP00000080183 ENSSSAP00000080183 rfc5 rfc5 LOC106587256 LOC106587256 ENSSSAP00000088520 ENSSSAP00000088520 LOC106605109 LOC106605109 rmi1 rmi1 rpa3 rpa3 rfc4 rfc4 ENSSSAP00000090923 ENSSSAP00000090923 LOC106581758 LOC106581758 LOC106590210 LOC106590210 LOC106578660 LOC106578660 LOC106570310 LOC106570310 rad50 rad50 ENSSSAP00000103411 ENSSSAP00000103411 exo1 exo1 ENSSSAP00000105257 ENSSSAP00000105257 brca1 brca1 rad52 rad52 LOC106575507 LOC106575507 blm blm rad9b rad9b hus1 hus1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exd2Exonuclease 3'-5' domain-containing protein 2. (421 aa)
rfc3Replication factor C subunit 3 isoform X1. (334 aa)
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
LOC106563454Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (629 aa)
rfc2Replication factor C subunit 2. (381 aa)
RCBTB1RCC1 and BTB domain-containing protein 1-like isoform X1. (572 aa)
LOC106575945Tudor domain-containing protein 3-like isoform X2. (553 aa)
LOC106576420Uncharacterized protein LOC106576420. (316 aa)
slf1Ankyrin repeat domain-containing protein 32 isoform X1. (896 aa)
ENSSSAP00000019926annotation not available (202 aa)
cl032C12orf32 homolog. (316 aa)
LOC106591874Exonuclease 3'-5' domain-containing protein 2-like. (550 aa)
LOC106574987Tudor domain-containing protein 3-like. (110 aa)
LOC106574988Tudor domain-containing protein 3-like. (533 aa)
ENSSSAP00000025751annotation not available (80 aa)
recql4ATP-dependent DNA helicase Q4. (1404 aa)
ENSSSAP00000027284annotation not available (97 aa)
cp075-2OB DNA-binding domain-containing protein C16orf175 isoform X1. (147 aa)
rad17Cell cycle checkpoint protein RAD17. (712 aa)
wrnWerner syndrome ATP-dependent helicase isoform X2. (1467 aa)
ENSSSAP00000039085annotation not available (179 aa)
LOC106566947Tyrosine-protein kinase. (1113 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
ENSSSAP00000047854annotation not available (265 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
rpa2Replication protein A 32 kDa subunit. (278 aa)
LOC106563284Tyrosine-protein kinase. (1099 aa)
LOC106570830Uncharacterized protein LOC106570830 isoform X5. (2364 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (393 aa)
LOC106588659Replication protein A 32 kDa subunit-A-like isoform X1. (266 aa)
LOC106607343recQ-mediated genome instability protein 2-like. (147 aa)
LOC106574681RCC1 and BTB domain-containing protein 1-like isoform X3. (631 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
ENSSSAP00000062721annotation not available (344 aa)
RAD1Cell cycle checkpoint protein RAD1. (279 aa)
LOC106603125Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (693 aa)
ENSSSAP00000067401ATR interacting protein. (650 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (492 aa)
atrSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2476 aa)
Mre11MRE11 homolog, double strand break repair nuclease. (452 aa)
ankrd12Ankyrin repeat domain-containing protein 12 isoform X2. (2059 aa)
LOC106590185DNA topoisomerase 2-binding protein 1-A-like. (1534 aa)
LOC106592742Tudor domain-containing protein 3-like. (97 aa)
ENSSSAP00000079200Replication factor C (activator 1) 2. (372 aa)
ENSSSAP00000079966annotation not available (1325 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1073 aa)
ENSSSAP00000080183annotation not available (109 aa)
rfc5Replication factor C subunit 5. (341 aa)
LOC106587256Ankyrin repeat domain-containing protein 11-like isoform X1. (2892 aa)
ENSSSAP00000088520Replication factor C (activator 1) 5. (305 aa)
LOC106605109Replication protein A 32 kDa subunit-like. (278 aa)
rmi1recQ-mediated genome instability protein 1. (140 aa)
rpa3Replication protein A3. (159 aa)
rfc4Replication factor C subunit 4 isoform X1. (361 aa)
ENSSSAP00000090923annotation not available (91 aa)
LOC106581758Cell division cycle-associated protein 7-like isoform X2. (399 aa)
LOC106590210DNA endonuclease RBBP8-like. (723 aa)
LOC106578660DNA topoisomerase 2-binding protein 1-A-like isoform X1. (1446 aa)
LOC106570310Replication protein A 14 kDa subunit-like. (147 aa)
rad50DNA repair protein RAD50. (1316 aa)
ENSSSAP00000103411annotation not available (112 aa)
exo1Exonuclease 1. (786 aa)
ENSSSAP00000105257Serine-protein kinase ATM-like. (111 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
rad52DNA repair protein RAD52 homolog. (448 aa)
LOC106575507RCC1 and BTB domain-containing protein 1-like isoform X4. (700 aa)
blmBloom syndrome protein isoform X1. (1471 aa)
rad9bCell cycle checkpoint control protein RAD9B. (301 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (361 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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