STRINGSTRING
LOC106575507 LOC106575507 LOC106599031-2 LOC106599031-2 blm blm polh polh pole2 pole2 ENSSSAP00000112721 ENSSSAP00000112721 ENSSSAP00000105257 ENSSSAP00000105257 ENSSSAP00000025751 ENSSSAP00000025751 LOC106574988 LOC106574988 LOC106574987 LOC106574987 LOC106584674 LOC106584674 LOC106561361 LOC106561361 LOC106591874 LOC106591874 gen1 gen1 ENSSSAP00000019926 ENSSSAP00000019926 ENSSSAP00000019398 ENSSSAP00000019398 ENSSSAP00000019392 ENSSSAP00000019392 PCNA PCNA ENSSSAP00000017215 ENSSSAP00000017215 LOC106575945 LOC106575945 chek1 chek1 LOC106613703 LOC106613703 RCBTB1 RCBTB1 rfc2 rfc2 LOC106563454 LOC106563454 ENSSSAP00000012232 ENSSSAP00000012232 meiob meiob pold3 pold3 LOC106564178 LOC106564178 pold4 pold4 LOC106607888 LOC106607888 LOC106609453 LOC106609453 rfc3 rfc3 exd2 exd2 eme1 eme1 ENSSSAP00000000810 ENSSSAP00000000810 LOC106589789 LOC106589789 LOC106593073 LOC106593073 recql4 recql4 ENSSSAP00000027284 ENSSSAP00000027284 xrcc3 xrcc3 cp075-2 cp075-2 LOC106562992 LOC106562992 LOC106577450 LOC106577450 LOC106601920 LOC106601920 ENSSSAP00000036217 ENSSSAP00000036217 rad51d rad51d wrn wrn ENSSSAP00000039085 ENSSSAP00000039085 rad51 rad51 r51a1 r51a1 atm atm DPOD1 DPOD1 ENSSSAP00000047854 ENSSSAP00000047854 brca2 brca2 LOC106599031 LOC106599031 rfa1 rfa1 mus81 mus81 rpa2 rpa2 LOC106570830 LOC106570830 LOC106588659 LOC106588659 LOC100194654 LOC100194654 LOC106607343 LOC106607343 LOC106574681 LOC106574681 LOC106612933 LOC106612933 ENSSSAP00000062721 ENSSSAP00000062721 ENSSSAP00000065248 ENSSSAP00000065248 LOC106603125 LOC106603125 MRE11 MRE11 LOC106579187 LOC106579187 LOC106580445 LOC106580445 LOC106561074 LOC106561074 ENSSSAP00000071551 ENSSSAP00000071551 rad51c rad51c rcbtb2 rcbtb2 Mre11 Mre11 CG024 CG024 ankrd12 ankrd12 LOC106592742 LOC106592742 LOC106580482 LOC106580482 ENSSSAP00000079200 ENSSSAP00000079200 pole3 pole3 DNA2 DNA2 rfc5 rfc5 LOC106587256 LOC106587256 pole pole ENSSSAP00000088520 ENSSSAP00000088520 LOC106605109 LOC106605109 rmi1 rmi1 rpa3 rpa3 rfc4 rfc4 spidr spidr ENSSSAP00000090923 ENSSSAP00000090923 dpoe4 dpoe4 LOC106590210 LOC106590210 LOC100136537 LOC100136537 LOC106570310 LOC106570310 XRCC2 XRCC2 LOC100194659 LOC100194659 pold2 pold2 rad51b rad51b LOC106577118 LOC106577118 rad50 rad50 ENSSSAP00000102908 ENSSSAP00000102908 ENSSSAP00000104950 ENSSSAP00000104950 exo1 exo1 brca1 brca1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106575507RCC1 and BTB domain-containing protein 1-like isoform X4. (700 aa)
LOC106599031-2ubiquitin-60S ribosomal protein L40-like. (128 aa)
blmBloom syndrome protein isoform X1. (1471 aa)
polhDNA polymerase eta. (782 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (567 aa)
ENSSSAP00000112721annotation not available (332 aa)
ENSSSAP00000105257Serine-protein kinase ATM-like. (111 aa)
ENSSSAP00000025751annotation not available (80 aa)
LOC106574988Tudor domain-containing protein 3-like. (533 aa)
LOC106574987Tudor domain-containing protein 3-like. (110 aa)
LOC106584674kxDL motif-containing protein 1-like. (187 aa)
LOC106561361RAD51-associated protein 1-like isoform X1. (252 aa)
LOC106591874Exonuclease 3'-5' domain-containing protein 2-like. (550 aa)
gen1Flap endonuclease GEN homolog 1. (979 aa)
ENSSSAP00000019926annotation not available (202 aa)
ENSSSAP00000019398annotation not available (114 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSSSAP00000017215annotation not available (115 aa)
LOC106575945Tudor domain-containing protein 3-like isoform X2. (553 aa)
chek1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (480 aa)
LOC106613703DNA polymerase epsilon subunit 4-like. (149 aa)
RCBTB1RCC1 and BTB domain-containing protein 1-like isoform X1. (572 aa)
rfc2Replication factor C subunit 2. (381 aa)
LOC106563454Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (629 aa)
ENSSSAP00000012232annotation not available (93 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
pold3DNA polymerase delta subunit 3 isoform X1. (449 aa)
LOC106564178Partner and localizer of BRCA2-like. (1467 aa)
pold4DNA polymerase subunit delta-4. (125 aa)
LOC106607888DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
LOC106609453LOW QUALITY PROTEIN: RAD51-associated protein 1-like. (353 aa)
rfc3Replication factor C subunit 3 isoform X1. (334 aa)
exd2Exonuclease 3'-5' domain-containing protein 2. (421 aa)
eme1Crossover junction endonuclease EME1 isoform X1. (564 aa)
ENSSSAP00000000810annotation not available (258 aa)
LOC106589789Structure-specific endonuclease subunit SLX4-like isoform X1. (1073 aa)
LOC106593073Partner and localizer of BRCA2-like. (1294 aa)
recql4ATP-dependent DNA helicase Q4. (1404 aa)
ENSSSAP00000027284annotation not available (97 aa)
xrcc3DNA repair protein XRCC3. (371 aa)
cp075-2OB DNA-binding domain-containing protein C16orf175 isoform X1. (147 aa)
LOC106562992polyubiquitin-B. (305 aa)
LOC106577450Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (246 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
ENSSSAP00000036217annotation not available (352 aa)
rad51dDNA repair protein RAD51 homolog 4. (336 aa)
wrnWerner syndrome ATP-dependent helicase isoform X2. (1467 aa)
ENSSSAP00000039085annotation not available (179 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (340 aa)
r51a1RAD51-associated protein 1. (364 aa)
atmNon-specific serine/threonine protein kinase. (3172 aa)
DPOD1DNA polymerase. (899 aa)
ENSSSAP00000047854annotation not available (265 aa)
brca2Breast cancer type 2 susceptibility protein isoform X5. (2826 aa)
LOC106599031Ubiquitin A-52 residue ribosomal protein fusion product 1like 2. (128 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
mus81Crossover junction endonuclease MUS81. (575 aa)
rpa2Replication protein A 32 kDa subunit. (278 aa)
LOC106570830Uncharacterized protein LOC106570830 isoform X5. (2364 aa)
LOC106588659Replication protein A 32 kDa subunit-A-like isoform X1. (266 aa)
LOC100194654Salmo salar ribosomal protein S27-3 (LOC100194654), mRNA. (173 aa)
LOC106607343recQ-mediated genome instability protein 2-like. (147 aa)
LOC106574681RCC1 and BTB domain-containing protein 1-like isoform X3. (631 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
ENSSSAP00000062721annotation not available (344 aa)
ENSSSAP00000065248annotation not available (188 aa)
LOC106603125Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (693 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (474 aa)
LOC106579187Probable crossover junction endonuclease EME2. (256 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC106561074kxDL motif-containing protein 1-like isoform X1. (185 aa)
ENSSSAP00000071551annotation not available (131 aa)
rad51cDNA repair protein RAD51 homolog 3. (400 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (492 aa)
Mre11MRE11 homolog, double strand break repair nuclease. (452 aa)
CG024CG024 protein precursor. (74 aa)
ankrd12Ankyrin repeat domain-containing protein 12 isoform X2. (2059 aa)
LOC106592742Tudor domain-containing protein 3-like. (97 aa)
LOC106580482DNA polymerase kappa-like. (790 aa)
ENSSSAP00000079200Replication factor C (activator 1) 2. (372 aa)
pole3DNA-directed DNA polymerase epsilon 3. (151 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1073 aa)
rfc5Replication factor C subunit 5. (341 aa)
LOC106587256Ankyrin repeat domain-containing protein 11-like isoform X1. (2892 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
ENSSSAP00000088520Replication factor C (activator 1) 5. (305 aa)
LOC106605109Replication protein A 32 kDa subunit-like. (278 aa)
rmi1recQ-mediated genome instability protein 1. (140 aa)
rpa3Replication protein A3. (159 aa)
rfc4Replication factor C subunit 4 isoform X1. (361 aa)
spidrDNA repair-scaffolding protein. (990 aa)
ENSSSAP00000090923annotation not available (91 aa)
dpoe4DNA-directed DNA polymerase epsilon 4. (130 aa)
LOC106590210DNA endonuclease RBBP8-like. (723 aa)
LOC100136537Ubiquitin A-52 residue ribosomal protein fusion product 1like 1. (128 aa)
LOC106570310Replication protein A 14 kDa subunit-like. (147 aa)
XRCC2DNA repair protein XRCC2-like. (307 aa)
LOC100194659Salmo salar ubiquitin A-52 residue ribosomal protein fusion product 1like 2 (LOC100194659), mRNA. (128 aa)
pold2DNA polymerase subunit delta-2. (500 aa)
rad51bDNA repair protein RAD51 homolog 2 isoform X1. (418 aa)
LOC106577118ubiquitin-40S ribosomal protein S27a. (156 aa)
rad50DNA repair protein RAD50. (1316 aa)
ENSSSAP00000102908annotation not available (83 aa)
ENSSSAP00000104950Polymerase (DNA directed) kappa. (401 aa)
exo1Exonuclease 1. (786 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1567 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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