STRINGSTRING
ENSSSAP00000000171 ENSSSAP00000000171 ENSSSAP00000000250 ENSSSAP00000000250 ENSSSAP00000000686 ENSSSAP00000000686 LOC106601222 LOC106601222 rfc3 rfc3 usp7 usp7 aqr aqr LOC106608924 LOC106608924 PPIE PPIE nrde2 nrde2 rbx1 rbx1 xpp3 xpp3 LOC106606244 LOC106606244 LOC106609896 LOC106609896 CUL4B CUL4B LOC106608676 LOC106608676 pold4 pold4 pold3 pold3 meiob meiob tceanc2 tceanc2 ENSSSAP00000012232 ENSSSAP00000012232 rfc2 rfc2 RCBTB1 RCBTB1 LOC106567679 LOC106567679 polr2c polr2c LOC106613703 LOC106613703 ercc3 ercc3 Ercc3 Ercc3 LOC106607544 LOC106607544 LOC106574804 LOC106574804 ENSSSAP00000015966 ENSSSAP00000015966 ENSSSAP00000016601 ENSSSAP00000016601 LOC106567670 LOC106567670 PCNA PCNA ENSSSAP00000019392 ENSSSAP00000019392 ENSSSAP00000019398 ENSSSAP00000019398 ENSSSAP00000019926 ENSSSAP00000019926 LOC106589530 LOC106589530 gtf2h5 gtf2h5 polr2h polr2h ENSSSAP00000022087 ENSSSAP00000022087 LOC106584674 LOC106584674 ccnh ccnh ENSSSAP00000029424 ENSSSAP00000029424 LOC106566276 LOC106566276 LOC106562992 LOC106562992 LOC106598394 LOC106598394 LOC106601920 LOC106601920 LOC100196672 LOC100196672 LOC106566308 LOC106566308 ENSSSAP00000034961 ENSSSAP00000034961 LOC106570789 LOC106570789 syf1 syf1 LOC106606528 LOC106606528 ENSSSAP00000036217 ENSSSAP00000036217 mnat1 mnat1 gtf2h1 gtf2h1 gtf2h4 gtf2h4 ZNF830 ZNF830 POLR2B POLR2B ENSSSAP00000043992 ENSSSAP00000043992 ENSSSAP00000044108 ENSSSAP00000044108 ENSSSAP00000045384 ENSSSAP00000045384 LOC106577366 LOC106577366 DPOD1 DPOD1 ENSSSAP00000047854 ENSSSAP00000047854 LOC106599031 LOC106599031 ENSSSAP00000050371 ENSSSAP00000050371 rfa1 rfa1 rpa2 rpa2 LOC106569462 LOC106569462 LOC106605164 LOC106605164 lig3 lig3 LOC106588659 LOC106588659 LOC100194654 LOC100194654 LOC106574681 LOC106574681 RPAB5 RPAB5 tceanc tceanc LOC106562324 LOC106562324 LOC106573578 LOC106573578 LOC106612933 LOC106612933 LOC106604162 LOC106604162 ercc2 ercc2 LOC106612273 LOC106612273 ENSSSAP00000065248 ENSSSAP00000065248 ENSSSAP00000065847 ENSSSAP00000065847 LOC106591177 LOC106591177 TCEA1 TCEA1 LOC106580445 LOC106580445 LOC106561074 LOC106561074 ENSSSAP00000071155 ENSSSAP00000071155 ENSSSAP00000071551 ENSSSAP00000071551 uvssa uvssa LOC106605011 LOC106605011 rcbtb2 rcbtb2 ENSSSAP00000074105 ENSSSAP00000074105 ENSSSAP00000074515 ENSSSAP00000074515 CG024 CG024 LOC106561926 LOC106561926 LOC106589136 LOC106589136 polr2i-2 polr2i-2 LOC106580482 LOC106580482 ENSSSAP00000079200 ENSSSAP00000079200 pole3 pole3 LOC106607167 LOC106607167 rbx1-2 rbx1-2 rfc5 rfc5 LOC106582635 LOC106582635 LOC106611702 LOC106611702 pole pole LOC106584761 LOC106584761 LOC106607142 LOC106607142 LOC106584402 LOC106584402 ENSSSAP00000088520 ENSSSAP00000088520 LOC106605109 LOC106605109 rpa3 rpa3 rfc4 rfc4 ENSSSAP00000090923 ENSSSAP00000090923 dpoe4 dpoe4 ENSSSAP00000091663 ENSSSAP00000091663 ercc8 ercc8 rpb2 rpb2 ENSSSAP00000094070 ENSSSAP00000094070 cdk7 cdk7 ENSSSAP00000094271 ENSSSAP00000094271 ENSSSAP00000094959 ENSSSAP00000094959 LOC106575363 LOC106575363 LOC100136537 LOC100136537 ENSSSAP00000095840 ENSSSAP00000095840 LOC106570310 LOC106570310 LOC100194659 LOC100194659 ENSSSAP00000098749 ENSSSAP00000098749 ddb1 ddb1 pold2 pold2 ENSSSAP00000101078 ENSSSAP00000101078 cul4b cul4b LOC106577118 LOC106577118 ENSSSAP00000102908 ENSSSAP00000102908 gtf2h3 gtf2h3 LOC106612892 LOC106612892 ENSSSAP00000104950 ENSSSAP00000104950 LOC106564654 LOC106564654 LOC106575507 LOC106575507 LOC106599031-2 LOC106599031-2 pole2 pole2 LOC106574527 LOC106574527 ENSSSAP00000112721 ENSSSAP00000112721 prp19 prp19 LOC106603393 LOC106603393 ercc6 ercc6 ENSSSAP00000115415 ENSSSAP00000115415 LOC106577550 LOC106577550 lig1 lig1 ccd16 ccd16 rpb4 rpb4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSSAP00000000171PHD finger protein 3-like. (228 aa)
ENSSSAP00000000250annotation not available (1290 aa)
ENSSSAP00000000686MNAT1 component of CDK activating kinase. (303 aa)
LOC106601222DNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
rfc3Replication factor C subunit 3 isoform X1. (334 aa)
usp7Ubiquitin carboxyl-terminal hydrolase 7. (180 aa)
aqrIntron-binding protein aquarius. (1483 aa)
LOC106608924Histone acetyltransferase p300-like isoform X2. (2752 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (195 aa)
nrde2Protein NRDE2 homolog isoform X1. (1194 aa)
rbx1RING-box protein 1; E3 ubiquitin ligase component of multiple cullin-RING-based E3 ubiquitin-protein ligase (CRLs) complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins, including proteins involved in cell cycle progression, signal transduction, transcription and transcription-coupled nucleotide excision repair. CRLs complexes and arih1 collaborate in tandem to mediate ubiquitination of target proteins, arih1 mediating addition of the first ubiquitin on CRLs targets. The functional specificity of the E3 ubiquitin-protein ligase complexes d [...] (108 aa)
xpp3Histone acetyltransferase p300-like isoform X8. (2344 aa)
LOC106606244Ubiquitin carboxyl-terminal hydrolase. (501 aa)
LOC106609896pre-mRNA-processing factor 19. (505 aa)
CUL4Bcullin-4B-like isoform X1; Belongs to the cullin family. (899 aa)
LOC106608676DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1865 aa)
pold4DNA polymerase subunit delta-4. (125 aa)
pold3DNA polymerase delta subunit 3 isoform X1. (449 aa)
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)
tceanc2Transcription elongation factor A N-terminal and central domain-containing protein 2. (243 aa)
ENSSSAP00000012232annotation not available (93 aa)
rfc2Replication factor C subunit 2. (381 aa)
RCBTB1RCC1 and BTB domain-containing protein 1-like isoform X1. (572 aa)
LOC106567679Uroplakin-3b-like protein. (367 aa)
polr2cDNA-directed RNA polymerase II subunit RPB3. (275 aa)
LOC106613703DNA polymerase epsilon subunit 4-like. (149 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit. (759 aa)
Ercc3ERCC excision repair 3, TFIIH core complex helicase subunit. (100 aa)
LOC106607544pre-mRNA-splicing factor SYF1-like. (852 aa)
LOC106574804cullin-4A-like; Belongs to the cullin family. (642 aa)
ENSSSAP00000015966annotation not available (921 aa)
ENSSSAP00000016601annotation not available (175 aa)
LOC106567670DNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
ENSSSAP00000019398annotation not available (114 aa)
ENSSSAP00000019926annotation not available (202 aa)
LOC106589530CREB-binding protein-like isoform X4. (2921 aa)
gtf2h5General transcription factor IIH subunit 5. (71 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSSSAP00000022087annotation not available (256 aa)
LOC106584674kxDL motif-containing protein 1-like. (187 aa)
ccnhcyclin-H isoform X1; Belongs to the cyclin family. (324 aa)
ENSSSAP00000029424annotation not available (85 aa)
LOC106566276LOW QUALITY PROTEIN: pre-mRNA-splicing factor ISY1 homolog. (138 aa)
LOC106562992polyubiquitin-B. (305 aa)
LOC106598394cullin-4A-like isoform X1; Belongs to the cullin family. (514 aa)
LOC106601920DNA polymerase delta catalytic subunit-like. (681 aa)
LOC100196672General transcription factor IIH subunit. (393 aa)
LOC106566308Transcription elongation factor A protein 2-like isoform X1. (366 aa)
ENSSSAP00000034961Polymerase (RNA) II (DNA directed) polypeptide C. (274 aa)
LOC106570789DNA-directed RNA polymerases I, II, and III subunit RPABC4-like. (77 aa)
syf1Salmo salar Pre-mRNA-splicing factor SYF1 (syf1), mRNA. (896 aa)
LOC106606528ATPase family AAA domain-containing protein 5-like isoform X1. (1873 aa)
ENSSSAP00000036217annotation not available (352 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (314 aa)
gtf2h1General transcription factor IIH subunit 1. (588 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
ZNF830Zinc finger protein 830-like. (345 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSSSAP00000043992annotation not available (284 aa)
ENSSSAP00000044108annotation not available (850 aa)
ENSSSAP00000045384Polymerase (RNA) II (DNA directed) polypeptide I. (89 aa)
LOC106577366PHD finger protein 3-like. (1794 aa)
DPOD1DNA polymerase. (899 aa)
ENSSSAP00000047854annotation not available (265 aa)
LOC106599031Ubiquitin A-52 residue ribosomal protein fusion product 1like 2. (128 aa)
ENSSSAP00000050371annotation not available (93 aa)
rfa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
rpa2Replication protein A 32 kDa subunit. (278 aa)
LOC106569462DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
LOC106605164DNA repair protein XRCC1-like. (989 aa)
lig3DNA ligase. (1023 aa)
LOC106588659Replication protein A 32 kDa subunit-A-like isoform X1. (266 aa)
LOC100194654Salmo salar ribosomal protein S27-3 (LOC100194654), mRNA. (173 aa)
LOC106574681RCC1 and BTB domain-containing protein 1-like isoform X3. (631 aa)
RPAB5DNA-directed RNA polymerases I, II, and III subunit RPABC5. (188 aa)
tceancTranscription elongation factor A N-terminal and central domain-containing protein. (424 aa)
LOC106562324DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
LOC106573578DNA-directed RNA polymerases I, II, and III subunit RPABC1-like. (210 aa)
LOC106612933Replication protein A 70 kDa DNA-binding subunit-like. (632 aa)
LOC106604162DNA-directed RNA polymerase II subunit RPB7-like. (178 aa)
ercc2TFIIH basal transcription factor complex helicase subunit. (849 aa)
LOC106612273DNA-directed RNA polymerase II subunit RPB7. (172 aa)
ENSSSAP00000065248annotation not available (188 aa)
ENSSSAP00000065847annotation not available (153 aa)
LOC106591177Ubiquitin carboxyl-terminal hydrolase 7-like. (289 aa)
TCEA1Transcription elongation factor A protein 1-like. (155 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC106561074kxDL motif-containing protein 1-like isoform X1. (185 aa)
ENSSSAP00000071155annotation not available (73 aa)
ENSSSAP00000071551annotation not available (131 aa)
uvssaUV-stimulated scaffold protein A isoform X1. (749 aa)
LOC106605011Serine/arginine repetitive matrix protein 1-like isoform X1. (762 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (492 aa)
ENSSSAP00000074105DNA-directed RNA polymerase II subunit RPB11-a-like. (96 aa)
ENSSSAP00000074515Excision repair cross-complementation group 2. (324 aa)
CG024CG024 protein precursor. (74 aa)
LOC106561926DNA damage-binding protein 1-like isoform X1. (1139 aa)
LOC106589136DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
polr2i-2DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC106580482DNA polymerase kappa-like. (790 aa)
ENSSSAP00000079200Replication factor C (activator 1) 2. (372 aa)
pole3DNA-directed DNA polymerase epsilon 3. (151 aa)
LOC106607167Histone acetyltransferase p300-like isoform X9. (2695 aa)
rbx1-2Salmo salar ring-box 1 (rbx1), mRNA. (108 aa)
rfc5Replication factor C subunit 5. (341 aa)
LOC106582635DNA repair protein XRCC1-like. (633 aa)
LOC106611702pre-mRNA-processing factor 19-like. (505 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2292 aa)
LOC106584761General transcription factor IIH subunit 1-like. (599 aa)
LOC106607142DNA-directed RNA polymerases I, II, and III subunit RPABC2-like. (151 aa)
LOC106584402Transcription elongation factor A protein 3-like isoform X3. (421 aa)
ENSSSAP00000088520Replication factor C (activator 1) 5. (305 aa)
LOC106605109Replication protein A 32 kDa subunit-like. (278 aa)
rpa3Replication protein A3. (159 aa)
rfc4Replication factor C subunit 4 isoform X1. (361 aa)
ENSSSAP00000090923annotation not available (91 aa)
dpoe4DNA-directed DNA polymerase epsilon 4. (130 aa)
ENSSSAP00000091663annotation not available (332 aa)
ercc8DNA excision repair protein ERCC-8 isoform X1. (400 aa)
rpb2Salmo salar DNA-directed RNA polymerase II subunit RPB2 (rpb2), mRNA. (1230 aa)
ENSSSAP00000094070annotation not available (89 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (354 aa)
ENSSSAP00000094271annotation not available (102 aa)
ENSSSAP00000094959annotation not available (507 aa)
LOC106575363Ubiquitin carboxyl-terminal hydrolase 40-like isoform X1; Belongs to the peptidase C19 family. (1276 aa)
LOC100136537Ubiquitin A-52 residue ribosomal protein fusion product 1like 1. (128 aa)
ENSSSAP00000095840Cyclin H. (183 aa)
LOC106570310Replication protein A 14 kDa subunit-like. (147 aa)
LOC100194659Salmo salar ubiquitin A-52 residue ribosomal protein fusion product 1like 2 (LOC100194659), mRNA. (128 aa)
ENSSSAP00000098749annotation not available (862 aa)
ddb1Salmo salar DNA damage-binding protein 1 (ddb1), mRNA. (1244 aa)
pold2DNA polymerase subunit delta-2. (500 aa)
ENSSSAP00000101078annotation not available (498 aa)
cul4bcullin-4B isoform X1; Belongs to the cullin family. (890 aa)
LOC106577118ubiquitin-40S ribosomal protein S27a. (156 aa)
ENSSSAP00000102908annotation not available (83 aa)
gtf2h3General transcription factor IIH subunit 3. (303 aa)
LOC106612892DNA-directed RNA polymerase II subunit RPB4. (142 aa)
ENSSSAP00000104950Polymerase (DNA directed) kappa. (401 aa)
LOC106564654ATPase family AAA domain-containing protein 5-like isoform X2. (547 aa)
LOC106575507RCC1 and BTB domain-containing protein 1-like isoform X4. (700 aa)
LOC106599031-2ubiquitin-60S ribosomal protein L40-like. (128 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (567 aa)
LOC106574527Ubiquitin carboxyl-terminal hydrolase 40-like; Belongs to the peptidase C19 family. (1274 aa)
ENSSSAP00000112721annotation not available (332 aa)
prp19Pre-mRNA-processing factor 19. (505 aa)
LOC106603393Short transient receptor potential channel 2-like. (448 aa)
ercc6DNA excision repair protein ERCC-6. (1488 aa)
ENSSSAP00000115415annotation not available (257 aa)
LOC106577550DNA-directed RNA polymerase II subunit RPB1. (1893 aa)
lig1DNA ligase. (1088 aa)
ccd16Coiled-coil domain-containing protein 16. (352 aa)
rpb4DNA-directed RNA polymerase II subunit RPB4. (143 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]