22 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106599735	Receptor-interacting serine/threonine-protein kinase 1-like isoform X1. (711 aa)
	LOC106578371	Tumor necrosis factor ligand superfamily member 10-like; Belongs to the tumor necrosis factor family. (291 aa)
	LOC106580524	Tumor necrosis factor receptor superfamily member 10A-like isoform X2. (421 aa)
	LOC106562229	Tumor necrosis factor receptor type 1-associated DEATH domain protein-like. (299 aa)
	ENSSSAP00000025204	annotation not available (182 aa)
	LOC106563020	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)
	LOC100136459	Caspase 8-like protein. (499 aa)
	LOC106587129	FAS-associated death domain protein-like. (221 aa)
	LOC106563139	Tumor necrosis factor receptor superfamily member 10A-like. (455 aa)
	LOC106613961	Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family. (269 aa)
	LOC106567553	Tumor necrosis factor receptor superfamily member 10A-like. (460 aa)
	LOC106582588	CASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family. (323 aa)
	TNFL6	Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family. (355 aa)
	LOC106585142	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (628 aa)
	LOC106584955	Tumor necrosis factor receptor superfamily member 10B-like isoform X2. (438 aa)
	tnr6	Tumor necrosis factor receptor superfamily member 6 precursor. (330 aa)
	LOC106567744	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (595 aa)
	LOC106590519	Tumor necrosis factor ligand superfamily member 10-like isoform X2; Belongs to the tumor necrosis factor family. (289 aa)
	LOC106577010	Tumor necrosis factor receptor superfamily member 6-like isoform X1. (391 aa)
	LOC106561969	FAS-associated death domain protein-like. (195 aa)
	ripk1	Receptor-interacting serine/threonine-protein kinase 1. (695 aa)
	LOC106587422	Tumor necrosis factor receptor type 1-associated DEATH domain protein. (299 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000025204	LOC106561969	ENSSSAP00000025204	ENSSSAP00000115282	annotation not available	FAS-associated death domain protein-like.	0.973
ENSSSAP00000025204	LOC106562229	ENSSSAP00000025204	ENSSSAP00000023914	annotation not available	Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.	0.872
ENSSSAP00000025204	LOC106563020	ENSSSAP00000025204	ENSSSAP00000025941	annotation not available	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.739
ENSSSAP00000025204	LOC106563139	ENSSSAP00000025204	ENSSSAP00000049204	annotation not available	Tumor necrosis factor receptor superfamily member 10A-like.	0.878
ENSSSAP00000025204	LOC106567553	ENSSSAP00000025204	ENSSSAP00000059204	annotation not available	Tumor necrosis factor receptor superfamily member 10A-like.	0.878
ENSSSAP00000025204	LOC106567744	ENSSSAP00000025204	ENSSSAP00000109028	annotation not available	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.739
ENSSSAP00000025204	LOC106577010	ENSSSAP00000025204	ENSSSAP00000112944	annotation not available	Tumor necrosis factor receptor superfamily member 6-like isoform X1.	0.914
ENSSSAP00000025204	LOC106580524	ENSSSAP00000025204	ENSSSAP00000015310	annotation not available	Tumor necrosis factor receptor superfamily member 10A-like isoform X2.	0.632
ENSSSAP00000025204	LOC106582588	ENSSSAP00000025204	ENSSSAP00000060623	annotation not available	CASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family.	0.983
ENSSSAP00000025204	LOC106584955	ENSSSAP00000025204	ENSSSAP00000096357	annotation not available	Tumor necrosis factor receptor superfamily member 10B-like isoform X2.	0.632
ENSSSAP00000025204	LOC106585142	ENSSSAP00000025204	ENSSSAP00000091396	annotation not available	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.739
ENSSSAP00000025204	LOC106587129	ENSSSAP00000025204	ENSSSAP00000037844	annotation not available	FAS-associated death domain protein-like.	0.973
ENSSSAP00000025204	LOC106587422	ENSSSAP00000025204	ENSSSAP00000120048	annotation not available	Tumor necrosis factor receptor type 1-associated DEATH domain protein.	0.872
ENSSSAP00000025204	LOC106599735	ENSSSAP00000025204	ENSSSAP00000003991	annotation not available	Receptor-interacting serine/threonine-protein kinase 1-like isoform X1.	0.915
ENSSSAP00000025204	LOC106613961	ENSSSAP00000025204	ENSSSAP00000056750	annotation not available	Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family.	0.868
ENSSSAP00000025204	TNFL6	ENSSSAP00000025204	ENSSSAP00000062683	annotation not available	Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family.	0.868
ENSSSAP00000025204	ripk1	ENSSSAP00000025204	ENSSSAP00000116900	annotation not available	Receptor-interacting serine/threonine-protein kinase 1.	0.915
ENSSSAP00000025204	tnr6	ENSSSAP00000025204	ENSSSAP00000105513	annotation not available	Tumor necrosis factor receptor superfamily member 6 precursor.	0.914
LOC100136459	LOC106561969	ENSSSAP00000034747	ENSSSAP00000115282	Caspase 8-like protein.	FAS-associated death domain protein-like.	0.982
LOC100136459	LOC106562229	ENSSSAP00000034747	ENSSSAP00000023914	Caspase 8-like protein.	Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.	0.891