35 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106565995	GDH/6PGL endoplasmic bifunctional protein-like. (794 aa)
	tkt	Transketolase-like protein 2. (658 aa)
	LOC106611449	Ribose-5-phosphate isomerase-like. (315 aa)
	LOC106599499	Ribose-5-phosphate isomerase-like. (293 aa)
	LOC106582040	Ribulose-phosphate 3-epimerase-like. (190 aa)
	LOC106565155	Transketolase-like. (633 aa)
	pgls	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (257 aa)
	LOC100380727	Transketolase-like protein 2. (642 aa)
	ENSSSAP00000053532	Ribose-phosphate pyrophosphokinase 1-like. (331 aa)
	rpe	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (228 aa)
	LOC106595626	Ribose-5-phosphate isomerase-like. (143 aa)
	prps2	Ribose-phosphate pyrophosphokinase 2. (318 aa)
	shpk	Sedoheptulokinase isoform X1. (497 aa)
	LOC106583364	Transketolase-like. (604 aa)
	ENSSSAP00000075662	annotation not available (290 aa)
	ENSSSAP00000009032	Sedoheptulokinase. (348 aa)
	LOC106612209	Ribose-phosphate pyrophosphokinase 1-like isoform X2. (325 aa)
	TKT	Transketolase-like. (643 aa)
	dera	Deoxyribose-phosphate aldolase isoform X1. (319 aa)
	rbm45	RNA-binding protein 45. (471 aa)
	rbks	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (339 aa)
	DERA	Deoxyribose-phosphate aldolase. (142 aa)
	LOC106572705	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (539 aa)
	ENSSSAP00000028592	annotation not available (182 aa)
	LOC106604323	Ribose-phosphate pyrophosphokinase 1-like. (373 aa)
	TKT-2	Transketolase-like. (642 aa)
	LOC106582765	GDH/6PGL endoplasmic bifunctional protein-like. (795 aa)
	prps1	Salmo salar Ribose-phosphate pyrophosphokinase 1 (prps1), mRNA. (335 aa)
	taldo	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (338 aa)
	ENSSSAP00000101386	annotation not available (252 aa)
	LOC106574406	Ribose-phosphate pyrophosphokinase 2. (322 aa)
	LOC106582466	RNA-binding protein 45-like. (467 aa)
	ENSSSAP00000087422	Transaldolase 1. (324 aa)
	g6pd	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (572 aa)
	LOC106571947	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (563 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DERA	ENSSSAP00000075662	ENSSSAP00000022053	ENSSSAP00000075662	Deoxyribose-phosphate aldolase.	annotation not available	0.493
DERA	ENSSSAP00000087422	ENSSSAP00000022053	ENSSSAP00000087422	Deoxyribose-phosphate aldolase.	Transaldolase 1.	0.493
DERA	ENSSSAP00000101386	ENSSSAP00000022053	ENSSSAP00000101386	Deoxyribose-phosphate aldolase.	annotation not available	0.509
DERA	LOC100380727	ENSSSAP00000022053	ENSSSAP00000049314	Deoxyribose-phosphate aldolase.	Transketolase-like protein 2.	0.504
DERA	LOC106565155	ENSSSAP00000022053	ENSSSAP00000045232	Deoxyribose-phosphate aldolase.	Transketolase-like.	0.504
DERA	LOC106565995	ENSSSAP00000022053	ENSSSAP00000035754	Deoxyribose-phosphate aldolase.	GDH/6PGL endoplasmic bifunctional protein-like.	0.638
DERA	LOC106571947	ENSSSAP00000022053	ENSSSAP00000085547	Deoxyribose-phosphate aldolase.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.463
DERA	LOC106572705	ENSSSAP00000022053	ENSSSAP00000023678	Deoxyribose-phosphate aldolase.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.463
DERA	LOC106582040	ENSSSAP00000022053	ENSSSAP00000041022	Deoxyribose-phosphate aldolase.	Ribulose-phosphate 3-epimerase-like.	0.656
DERA	LOC106582466	ENSSSAP00000022053	ENSSSAP00000090087	Deoxyribose-phosphate aldolase.	RNA-binding protein 45-like.	0.511
DERA	LOC106582765	ENSSSAP00000022053	ENSSSAP00000085505	Deoxyribose-phosphate aldolase.	GDH/6PGL endoplasmic bifunctional protein-like.	0.638
DERA	LOC106583364	ENSSSAP00000022053	ENSSSAP00000071496	Deoxyribose-phosphate aldolase.	Transketolase-like.	0.504
DERA	LOC106595626	ENSSSAP00000022053	ENSSSAP00000059705	Deoxyribose-phosphate aldolase.	Ribose-5-phosphate isomerase-like.	0.554
DERA	LOC106599499	ENSSSAP00000022053	ENSSSAP00000000029	Deoxyribose-phosphate aldolase.	Ribose-5-phosphate isomerase-like.	0.554
DERA	LOC106611449	ENSSSAP00000022053	ENSSSAP00000040279	Deoxyribose-phosphate aldolase.	Ribose-5-phosphate isomerase-like.	0.554
DERA	TKT	ENSSSAP00000022053	ENSSSAP00000011170	Deoxyribose-phosphate aldolase.	Transketolase-like.	0.504
DERA	TKT-2	ENSSSAP00000022053	ENSSSAP00000035435	Deoxyribose-phosphate aldolase.	Transketolase-like.	0.504
DERA	g6pd	ENSSSAP00000022053	ENSSSAP00000086018	Deoxyribose-phosphate aldolase.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.463
DERA	pgls	ENSSSAP00000022053	ENSSSAP00000046369	Deoxyribose-phosphate aldolase.	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.	0.441
DERA	rbks	ENSSSAP00000022053	ENSSSAP00000019323	Deoxyribose-phosphate aldolase.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.509