7 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106609245	Forkhead box protein P2-like isoform X4. (786 aa)
	LOC106595378	Runt-related transcription factor. (334 aa)
	LOC106575592	Runt-related transcription factor 1-like. (228 aa)
	ENSSSAP00000053471	Forkhead box P2. (686 aa)
	LOC106560844	Core-binding factor subunit beta-like. (197 aa)
	ENSSSAP00000079102	annotation not available (148 aa)
	LOC106573726	Core-binding factor subunit beta isoform X1. (198 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000053471	ENSSSAP00000079102	ENSSSAP00000053471	ENSSSAP00000079102	Forkhead box P2.	annotation not available	0.424
ENSSSAP00000053471	LOC106560844	ENSSSAP00000053471	ENSSSAP00000073854	Forkhead box P2.	Core-binding factor subunit beta-like.	0.566
ENSSSAP00000053471	LOC106573726	ENSSSAP00000053471	ENSSSAP00000083202	Forkhead box P2.	Core-binding factor subunit beta isoform X1.	0.566
ENSSSAP00000053471	LOC106575592	ENSSSAP00000053471	ENSSSAP00000052052	Forkhead box P2.	Runt-related transcription factor 1-like.	0.424
ENSSSAP00000053471	LOC106595378	ENSSSAP00000053471	ENSSSAP00000023121	Forkhead box P2.	Runt-related transcription factor.	0.424
ENSSSAP00000079102	ENSSSAP00000053471	ENSSSAP00000079102	ENSSSAP00000053471	annotation not available	Forkhead box P2.	0.424
ENSSSAP00000079102	LOC106560844	ENSSSAP00000079102	ENSSSAP00000073854	annotation not available	Core-binding factor subunit beta-like.	0.913
ENSSSAP00000079102	LOC106573726	ENSSSAP00000079102	ENSSSAP00000083202	annotation not available	Core-binding factor subunit beta isoform X1.	0.913
ENSSSAP00000079102	LOC106609245	ENSSSAP00000079102	ENSSSAP00000006986	annotation not available	Forkhead box protein P2-like isoform X4.	0.424
LOC106560844	ENSSSAP00000053471	ENSSSAP00000073854	ENSSSAP00000053471	Core-binding factor subunit beta-like.	Forkhead box P2.	0.566
LOC106560844	ENSSSAP00000079102	ENSSSAP00000073854	ENSSSAP00000079102	Core-binding factor subunit beta-like.	annotation not available	0.913
LOC106560844	LOC106575592	ENSSSAP00000073854	ENSSSAP00000052052	Core-binding factor subunit beta-like.	Runt-related transcription factor 1-like.	0.913
LOC106560844	LOC106595378	ENSSSAP00000073854	ENSSSAP00000023121	Core-binding factor subunit beta-like.	Runt-related transcription factor.	0.913
LOC106560844	LOC106609245	ENSSSAP00000073854	ENSSSAP00000006986	Core-binding factor subunit beta-like.	Forkhead box protein P2-like isoform X4.	0.566
LOC106573726	ENSSSAP00000053471	ENSSSAP00000083202	ENSSSAP00000053471	Core-binding factor subunit beta isoform X1.	Forkhead box P2.	0.566
LOC106573726	ENSSSAP00000079102	ENSSSAP00000083202	ENSSSAP00000079102	Core-binding factor subunit beta isoform X1.	annotation not available	0.913
LOC106573726	LOC106575592	ENSSSAP00000083202	ENSSSAP00000052052	Core-binding factor subunit beta isoform X1.	Runt-related transcription factor 1-like.	0.913
LOC106573726	LOC106595378	ENSSSAP00000083202	ENSSSAP00000023121	Core-binding factor subunit beta isoform X1.	Runt-related transcription factor.	0.913
LOC106573726	LOC106609245	ENSSSAP00000083202	ENSSSAP00000006986	Core-binding factor subunit beta isoform X1.	Forkhead box protein P2-like isoform X4.	0.566
LOC106575592	ENSSSAP00000053471	ENSSSAP00000052052	ENSSSAP00000053471	Runt-related transcription factor 1-like.	Forkhead box P2.	0.424