8 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106606488	LOW QUALITY PROTEIN: CREB-binding protein-like. (2296 aa)
	LOC106590442	CREB-binding protein-like isoform X1. (2411 aa)
	LOC106595378	Runt-related transcription factor. (334 aa)
	LOC106564464	CREB-binding protein-like isoform X6. (2486 aa)
	ENSSSAP00000079102	annotation not available (148 aa)
	LOC106573726	Core-binding factor subunit beta isoform X1. (198 aa)
	LOC106575592	Runt-related transcription factor 1-like. (228 aa)
	LOC106560844	Core-binding factor subunit beta-like. (197 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000079102	LOC106560844	ENSSSAP00000079102	ENSSSAP00000073854	annotation not available	Core-binding factor subunit beta-like.	0.913
ENSSSAP00000079102	LOC106564464	ENSSSAP00000079102	ENSSSAP00000014055	annotation not available	CREB-binding protein-like isoform X6.	0.607
ENSSSAP00000079102	LOC106573726	ENSSSAP00000079102	ENSSSAP00000083202	annotation not available	Core-binding factor subunit beta isoform X1.	0.913
ENSSSAP00000079102	LOC106590442	ENSSSAP00000079102	ENSSSAP00000043542	annotation not available	CREB-binding protein-like isoform X1.	0.607
ENSSSAP00000079102	LOC106606488	ENSSSAP00000079102	ENSSSAP00000047340	annotation not available	LOW QUALITY PROTEIN: CREB-binding protein-like.	0.607
LOC106560844	ENSSSAP00000079102	ENSSSAP00000073854	ENSSSAP00000079102	Core-binding factor subunit beta-like.	annotation not available	0.913
LOC106560844	LOC106564464	ENSSSAP00000073854	ENSSSAP00000014055	Core-binding factor subunit beta-like.	CREB-binding protein-like isoform X6.	0.596
LOC106560844	LOC106575592	ENSSSAP00000073854	ENSSSAP00000052052	Core-binding factor subunit beta-like.	Runt-related transcription factor 1-like.	0.913
LOC106560844	LOC106590442	ENSSSAP00000073854	ENSSSAP00000043542	Core-binding factor subunit beta-like.	CREB-binding protein-like isoform X1.	0.596
LOC106560844	LOC106595378	ENSSSAP00000073854	ENSSSAP00000023121	Core-binding factor subunit beta-like.	Runt-related transcription factor.	0.913
LOC106560844	LOC106606488	ENSSSAP00000073854	ENSSSAP00000047340	Core-binding factor subunit beta-like.	LOW QUALITY PROTEIN: CREB-binding protein-like.	0.596
LOC106564464	ENSSSAP00000079102	ENSSSAP00000014055	ENSSSAP00000079102	CREB-binding protein-like isoform X6.	annotation not available	0.607
LOC106564464	LOC106560844	ENSSSAP00000014055	ENSSSAP00000073854	CREB-binding protein-like isoform X6.	Core-binding factor subunit beta-like.	0.596
LOC106564464	LOC106573726	ENSSSAP00000014055	ENSSSAP00000083202	CREB-binding protein-like isoform X6.	Core-binding factor subunit beta isoform X1.	0.596
LOC106564464	LOC106575592	ENSSSAP00000014055	ENSSSAP00000052052	CREB-binding protein-like isoform X6.	Runt-related transcription factor 1-like.	0.607
LOC106564464	LOC106595378	ENSSSAP00000014055	ENSSSAP00000023121	CREB-binding protein-like isoform X6.	Runt-related transcription factor.	0.607
LOC106573726	ENSSSAP00000079102	ENSSSAP00000083202	ENSSSAP00000079102	Core-binding factor subunit beta isoform X1.	annotation not available	0.913
LOC106573726	LOC106564464	ENSSSAP00000083202	ENSSSAP00000014055	Core-binding factor subunit beta isoform X1.	CREB-binding protein-like isoform X6.	0.596
LOC106573726	LOC106575592	ENSSSAP00000083202	ENSSSAP00000052052	Core-binding factor subunit beta isoform X1.	Runt-related transcription factor 1-like.	0.913
LOC106573726	LOC106590442	ENSSSAP00000083202	ENSSSAP00000043542	Core-binding factor subunit beta isoform X1.	CREB-binding protein-like isoform X1.	0.596