12 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106589575	Extracellular serine/threonine protein kinase FAM20C-like. (635 aa)
	LOC106609787	Extracellular serine/threonine protein kinase FAM20C-like. (566 aa)
	ENSSSAP00000001245	annotation not available (162 aa)
	FAM20A	Protein FAM20A-like. (546 aa)
	LOC106601828	Extracellular serine/threonine protein kinase FAM20C-like. (534 aa)
	LOC106591397	Extracellular serine/threonine protein kinase FAM20C-like. (577 aa)
	LOC106607519	Extracellular serine/threonine protein kinase FAM20C-like. (617 aa)
	ENSSSAP00000025386	Extracellular serine/threonine protein kinase FAM20C-like. (207 aa)
	fam20a	Pseudokinase FAM20A isoform X1. (541 aa)
	ENSSSAP00000044935	annotation not available (140 aa)
	LOC106613959	Glycosaminoglycan xylosylkinase isoform X1. (409 aa)
	LOC106584281	Glycosaminoglycan xylosylkinase-like. (409 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000001245	LOC106589575	ENSSSAP00000001245	ENSSSAP00000048772	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.852
ENSSSAP00000001245	LOC106601828	ENSSSAP00000001245	ENSSSAP00000005046	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.576
ENSSSAP00000001245	LOC106607519	ENSSSAP00000001245	ENSSSAP00000007272	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.857
ENSSSAP00000001245	LOC106609787	ENSSSAP00000001245	ENSSSAP00000000550	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.852
ENSSSAP00000025386	LOC106589575	ENSSSAP00000025386	ENSSSAP00000048772	Extracellular serine/threonine protein kinase FAM20C-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.853
ENSSSAP00000025386	LOC106601828	ENSSSAP00000025386	ENSSSAP00000005046	Extracellular serine/threonine protein kinase FAM20C-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.578
ENSSSAP00000025386	LOC106607519	ENSSSAP00000025386	ENSSSAP00000007272	Extracellular serine/threonine protein kinase FAM20C-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.856
ENSSSAP00000025386	LOC106609787	ENSSSAP00000025386	ENSSSAP00000000550	Extracellular serine/threonine protein kinase FAM20C-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.853
ENSSSAP00000044935	LOC106589575	ENSSSAP00000044935	ENSSSAP00000048772	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.852
ENSSSAP00000044935	LOC106601828	ENSSSAP00000044935	ENSSSAP00000005046	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.576
ENSSSAP00000044935	LOC106607519	ENSSSAP00000044935	ENSSSAP00000007272	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.855
ENSSSAP00000044935	LOC106609787	ENSSSAP00000044935	ENSSSAP00000000550	annotation not available	Extracellular serine/threonine protein kinase FAM20C-like.	0.852
FAM20A	LOC106589575	ENSSSAP00000003159	ENSSSAP00000048772	Protein FAM20A-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.979
FAM20A	LOC106601828	ENSSSAP00000003159	ENSSSAP00000005046	Protein FAM20A-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.711
FAM20A	LOC106607519	ENSSSAP00000003159	ENSSSAP00000007272	Protein FAM20A-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.858
FAM20A	LOC106609787	ENSSSAP00000003159	ENSSSAP00000000550	Protein FAM20A-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.979
LOC106584281	LOC106589575	ENSSSAP00000062697	ENSSSAP00000048772	Glycosaminoglycan xylosylkinase-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.783
LOC106584281	LOC106601828	ENSSSAP00000062697	ENSSSAP00000005046	Glycosaminoglycan xylosylkinase-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.550
LOC106584281	LOC106607519	ENSSSAP00000062697	ENSSSAP00000007272	Glycosaminoglycan xylosylkinase-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.790
LOC106584281	LOC106609787	ENSSSAP00000062697	ENSSSAP00000000550	Glycosaminoglycan xylosylkinase-like.	Extracellular serine/threonine protein kinase FAM20C-like.	0.783