23 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	igfbp-6b2	Insulin-like growth factor binding protein 6 paralog B2 isoform X1. (208 aa)
	igf1r	Tyrosine-protein kinase receptor. (1425 aa)
	RPS29	40S ribosomal protein S29. (67 aa)
	igfbp6	Insulin-like growth factor binding protein 6 paralog B1. (205 aa)
	RPS13	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	ENSSSAP00000060772	Insulin-like growth factor binding protein 2a. (160 aa)
	LOC100136370	Rhodopsin. (354 aa)
	IGFBP3	Insulin-like growth factor binding protein 3 paralog B1 precursor. (299 aa)
	ENSSSAP00000050257	Ribosomal protein S13. (229 aa)
	ENSSSAP00000052249	Insulin-like growth factor binding protein 2a. (153 aa)
	LOC100136550	Insulin-like growth factor II. (214 aa)
	rps13	40S ribosomal protein S13-like; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	IGFBP1	Insulin-like growth factor binding protein 1 paralog B2 precursor. (247 aa)
	RHO	Rhodopsin. (354 aa)
	igfbp-1a2	Insulin-like growth factor binding protein 1 paralog A2 isoform X1. (263 aa)
	igfbp-1a1	Insulin-like growth factor binding protein 1 paralog A1 precursor. (341 aa)
	IGFBP-3A1	Insulin-like growth factor binding protein 3 paralog A1 precursor. (296 aa)
	hprt1	Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (227 aa)
	IGFBP-2B1	Insulin-like growth factor binding protein 2 paralog B1. (283 aa)
	LOC106609475	Insulin-like growth factor I isoform X1. (211 aa)
	rho	Rhodopsin. (343 aa)
	igfbp-2b2	Insulin-like growth factor binding protein 2 paralog B2 isoform X3. (403 aa)
	RPL4	Ribosomal protein L4. (379 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000050257	RPL4	ENSSSAP00000050257	ENSSSAP00000047959	Ribosomal protein S13.	Ribosomal protein L4.	0.996
ENSSSAP00000050257	RPS29	ENSSSAP00000050257	ENSSSAP00000076238	Ribosomal protein S13.	40S ribosomal protein S29.	0.997
ENSSSAP00000052249	LOC100136550	ENSSSAP00000052249	ENSSSAP00000051358	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor II.	0.903
ENSSSAP00000052249	LOC106609475	ENSSSAP00000052249	ENSSSAP00000040530	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor I isoform X1.	0.918
ENSSSAP00000060772	IGFBP-3A1	ENSSSAP00000060772	ENSSSAP00000022151	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor binding protein 3 paralog A1 precursor.	0.526
ENSSSAP00000060772	IGFBP3	ENSSSAP00000060772	ENSSSAP00000116492	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor binding protein 3 paralog B1 precursor.	0.526
ENSSSAP00000060772	LOC100136550	ENSSSAP00000060772	ENSSSAP00000051358	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor II.	0.903
ENSSSAP00000060772	LOC106609475	ENSSSAP00000060772	ENSSSAP00000040530	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor I isoform X1.	0.918
ENSSSAP00000060772	igfbp-1a1	ENSSSAP00000060772	ENSSSAP00000022116	Insulin-like growth factor binding protein 2a.	Insulin-like growth factor binding protein 1 paralog A1 precursor.	0.420
IGFBP-2B1	LOC100136550	ENSSSAP00000033667	ENSSSAP00000051358	Insulin-like growth factor binding protein 2 paralog B1.	Insulin-like growth factor II.	0.439
IGFBP-3A1	ENSSSAP00000060772	ENSSSAP00000022151	ENSSSAP00000060772	Insulin-like growth factor binding protein 3 paralog A1 precursor.	Insulin-like growth factor binding protein 2a.	0.526
IGFBP-3A1	LOC100136550	ENSSSAP00000022151	ENSSSAP00000051358	Insulin-like growth factor binding protein 3 paralog A1 precursor.	Insulin-like growth factor II.	0.874
IGFBP-3A1	LOC106609475	ENSSSAP00000022151	ENSSSAP00000040530	Insulin-like growth factor binding protein 3 paralog A1 precursor.	Insulin-like growth factor I isoform X1.	0.985
IGFBP1	IGFBP3	ENSSSAP00000003429	ENSSSAP00000116492	Insulin-like growth factor binding protein 1 paralog B2 precursor.	Insulin-like growth factor binding protein 3 paralog B1 precursor.	0.400
IGFBP1	LOC100136550	ENSSSAP00000003429	ENSSSAP00000051358	Insulin-like growth factor binding protein 1 paralog B2 precursor.	Insulin-like growth factor II.	0.933
IGFBP1	LOC106609475	ENSSSAP00000003429	ENSSSAP00000040530	Insulin-like growth factor binding protein 1 paralog B2 precursor.	Insulin-like growth factor I isoform X1.	0.991
IGFBP1	igfbp-6b2	ENSSSAP00000003429	ENSSSAP00000109290	Insulin-like growth factor binding protein 1 paralog B2 precursor.	Insulin-like growth factor binding protein 6 paralog B2 isoform X1.	0.623
IGFBP1	igfbp6	ENSSSAP00000003429	ENSSSAP00000076556	Insulin-like growth factor binding protein 1 paralog B2 precursor.	Insulin-like growth factor binding protein 6 paralog B1.	0.769
IGFBP3	ENSSSAP00000060772	ENSSSAP00000116492	ENSSSAP00000060772	Insulin-like growth factor binding protein 3 paralog B1 precursor.	Insulin-like growth factor binding protein 2a.	0.526
IGFBP3	IGFBP1	ENSSSAP00000116492	ENSSSAP00000003429	Insulin-like growth factor binding protein 3 paralog B1 precursor.	Insulin-like growth factor binding protein 1 paralog B2 precursor.	0.400