STRINGSTRING
LOC100136525 LOC100136525 ctrl ctrl GPX2 GPX2 LOC100136352 LOC100136352 MYG MYG gpx8 gpx8 LOC100194734 LOC100194734 GPX7 GPX7 LOC106577309 LOC106577309 LOC106602722 LOC106602722 ldha ldha LOC106596058 LOC106596058 LOC106568020 LOC106568020 LOC106590165 LOC106590165 LOC106564005 LOC106564005 LOC106566059 LOC106566059 pgk pgk ef1a ef1a LOC106612297 LOC106612297 LOC106612018 LOC106612018 LOC106570901 LOC106570901 sod2 sod2 LOC106586700 LOC106586700 LOC106576970 LOC106576970 casp3 casp3 LOC106611093 LOC106611093
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100136525Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)
ctrlHeat shock protein 70 isoform 3; Belongs to the heat shock protein 70 family. (656 aa)
GPX2Glutathione peroxidase; Belongs to the glutathione peroxidase family. (244 aa)
LOC100136352Actin-1. (410 aa)
MYGMyoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (147 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (265 aa)
LOC100194734Glutathione peroxidase; Belongs to the glutathione peroxidase family. (193 aa)
GPX7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (184 aa)
LOC106577309Glutathione peroxidase; Belongs to the glutathione peroxidase family. (134 aa)
LOC106602722Caspase-3-like; Belongs to the peptidase C14A family. (284 aa)
ldhaL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (321 aa)
LOC106596058Glutathione peroxidase; Belongs to the glutathione peroxidase family. (134 aa)
LOC106568020Phosphoglycerate kinase. (766 aa)
LOC106590165Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (458 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
LOC106566059Glutathione peroxidase; Belongs to the glutathione peroxidase family. (141 aa)
pgkPhosphoglycerate kinase. (417 aa)
ef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (495 aa)
LOC106612297Glutathione peroxidase; Belongs to the glutathione peroxidase family. (177 aa)
LOC106612018Caspase-3-like; Belongs to the peptidase C14A family. (283 aa)
LOC106570901Glutathione peroxidase; Belongs to the glutathione peroxidase family. (215 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (301 aa)
LOC106586700Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
LOC106576970Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (495 aa)
casp3Caspase 3B; Belongs to the peptidase C14A family. (311 aa)
LOC106611093Neuroglobin-2; Belongs to the globin family. (159 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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