STRINGSTRING
LOC106583049 LOC106583049 LOC106583048 LOC106583048 LOC106572240 LOC106572240 LOC106570911 LOC106570911 myog myog LOC106576326 LOC106576326 ENSSSAP00000019392 ENSSSAP00000019392 PCNA PCNA MYOD1 MYOD1 LOC106567593 LOC106567593 LOC106600082 LOC106600082 myod1 myod1 myf5 myf5 LOC106580445 LOC106580445 pax7 pax7 park7 park7 LOC100194670 LOC100194670 vps13d vps13d LOC106566813 LOC106566813 park7-2 park7-2 alb1 alb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106583049Paired box protein Pax-7-like isoform X6. (501 aa)
LOC106583048Taste receptor type 1 member 3-like. (911 aa)
LOC106572240Immunoglobulin superfamily member 21-like isoform X1. (492 aa)
LOC106570911Serum albumin 2-like. (608 aa)
myogMyogenin. (254 aa)
LOC106576326Myogenic factor. (239 aa)
ENSSSAP00000019392Proliferating cell nuclear antigen. (218 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
MYOD1Myogenic factor. (276 aa)
LOC106567593Histone H3; Belongs to the histone H3 family. (136 aa)
LOC106600082Histone H4. (103 aa)
myod1Salmo salar myogenic differentiation 1 (myod1), mRNA. (276 aa)
myf5Myogenic factor. (297 aa)
LOC106580445Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
pax7Salmo salar paired box protein 7 (pax7), mRNA. (714 aa)
park7Protein DJ-1 precursor. (171 aa)
LOC100194670Aldo-keto reductase family 7 member A5-like. (367 aa)
vps13dVacuolar protein sorting-associated protein 13D isoform X2. (4424 aa)
LOC106566813Immunoglobulin superfamily member 21-like isoform X1. (483 aa)
park7-2Protein DJ-1 isoform X1. (189 aa)
alb1Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. (658 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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