STRINGSTRING
LOC106577844 LOC106577844 LOC106583538 LOC106583538 LOC100136370 LOC100136370 LOC106564005 LOC106564005 RHO RHO LOC100136352 LOC100136352 LOC106608867 LOC106608867 rho rho
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106577844Phosphatidylinositol 3-kinase catalytic subunit type 3. (887 aa)
LOC106583538Rhodopsin. (347 aa)
LOC100136370Rhodopsin. (354 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
RHORhodopsin. (354 aa)
LOC100136352Actin-1. (410 aa)
LOC106608867Phosphatidylinositol 3-kinase catalytic subunit type 3. (887 aa)
rhoRhodopsin. (343 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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