STRINGSTRING
drosha drosha LOC106604392 LOC106604392 LOC106612106 LOC106612106 LOC106605021 LOC106605021 LOC106563563 LOC106563563 p38b-2 p38b-2 p38b p38b LOC106584161 LOC106584161 p38a p38a LOC106590795 LOC106590795 LOC100136559 LOC100136559 mkk6a mkk6a LOC106608297 LOC106608297 LOC106613337 LOC106613337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
droshaRibonuclease 3 isoform X1. (1437 aa)
LOC106604392Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
LOC106612106Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
LOC106605021Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
p38b-2Mitogen-activated protein kinase 14A-like. (361 aa)
p38bMitogen-activated protein kinase. (361 aa)
LOC106584161Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
p38aMitogen-activated protein kinase. (374 aa)
LOC106590795Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
mkk6aMitogen-activated protein kinase kinase 6a. (332 aa)
LOC106608297Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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