26 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106565821	GATA-binding factor 2-like isoform X1. (460 aa)
	LOC106589946	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (603 aa)
	tbp	TATA-box-binding protein isoform X1. (299 aa)
	elvol5a	Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...] (300 aa)
	LOC106565550	GATA-binding factor 2-like isoform X1. (464 aa)
	LOC106613851	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (535 aa)
	PPARA	Peroxisome proliferator-activated receptor alpha isoform X1. (477 aa)
	gata1	GATA-binding factor 1. (424 aa)
	elovl4	Elongation of very long chain fatty acids protein 4; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that specifically elongates C24:0 and C26:0 acyl-CoAs. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane [...] (306 aa)
	pxdn	Peroxidasin homolog isoform X1. (1489 aa)
	LOC100192340	Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...] (338 aa)
	SP3-2	Transcription factor Sp3-like isoform X1. (696 aa)
	LOC106572928	Peroxidasin-like. (1491 aa)
	LOC106601192	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (587 aa)
	nc2b	Dr1. (176 aa)
	GATA2	GATA-binding factor 2-like isoform X1. (464 aa)
	LOC106608626	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (595 aa)
	SP3	Transcription factor Sp3-like isoform X1. (703 aa)
	NFIB	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (558 aa)
	LOC106571493	Elongation of very long chain fatty acids protein 4; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that specifically elongates C24:0 and C26:0 acyl-CoAs. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane [...] (306 aa)
	endog	Endonuclease. (309 aa)
	LOC106584361	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (528 aa)
	LOC106582928	GATA-binding factor 2-like isoform X2. (456 aa)
	LOC106582882	GATA-binding factor 2-like isoform X2. (425 aa)
	dr1	Protein Dr1. (177 aa)
	nfia-2	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (507 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GATA2	LOC106582882	ENSSSAP00000084328	ENSSSAP00000120071	GATA-binding factor 2-like isoform X1.	GATA-binding factor 2-like isoform X2.	0.463
GATA2	LOC106584361	ENSSSAP00000084328	ENSSSAP00000048975	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	LOC106589946	ENSSSAP00000084328	ENSSSAP00000001129	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	LOC106601192	ENSSSAP00000084328	ENSSSAP00000090298	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.502
GATA2	LOC106608626	ENSSSAP00000084328	ENSSSAP00000069348	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	LOC106613851	ENSSSAP00000084328	ENSSSAP00000028724	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	NFIB	ENSSSAP00000084328	ENSSSAP00000062027	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	gata1	ENSSSAP00000084328	ENSSSAP00000017901	GATA-binding factor 2-like isoform X1.	GATA-binding factor 1.	0.463
GATA2	nfia-2	ENSSSAP00000084328	ENSSSAP00000038884	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.506
GATA2	tbp	ENSSSAP00000084328	ENSSSAP00000014212	GATA-binding factor 2-like isoform X1.	TATA-box-binding protein isoform X1.	0.722
LOC100192340	PPARA	ENSSSAP00000114332	ENSSSAP00000018830	Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...]	Peroxisome proliferator-activated receptor alpha isoform X1.	0.482
LOC100192340	elvol5a	ENSSSAP00000114332	ENSSSAP00000014573	Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...]	Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...]	0.901
LOC106565550	LOC106582882	ENSSSAP00000038314	ENSSSAP00000120071	GATA-binding factor 2-like isoform X1.	GATA-binding factor 2-like isoform X2.	0.463
LOC106565550	LOC106584361	ENSSSAP00000038314	ENSSSAP00000048975	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.690
LOC106565550	LOC106589946	ENSSSAP00000038314	ENSSSAP00000001129	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.690
LOC106565550	LOC106601192	ENSSSAP00000038314	ENSSSAP00000090298	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.689
LOC106565550	LOC106608626	ENSSSAP00000038314	ENSSSAP00000069348	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.690
LOC106565550	LOC106613851	ENSSSAP00000038314	ENSSSAP00000028724	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.690
LOC106565550	NFIB	ENSSSAP00000038314	ENSSSAP00000062027	GATA-binding factor 2-like isoform X1.	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.	0.690
LOC106565550	SP3	ENSSSAP00000038314	ENSSSAP00000068643	GATA-binding factor 2-like isoform X1.	Transcription factor Sp3-like isoform X1.	0.480