STRINGSTRING
LOC106572260 LOC106572260 LOC106601562 LOC106601562 LOC106609976 LOC106609976 LOC100136352 LOC100136352 LOC106590795 LOC106590795 atf3 atf3 LOC100136559 LOC100136559 LOC106585043 LOC106585043 CSF1R CSF1R PLD4 PLD4 LOC106601025 LOC106601025 LOC101448031 LOC101448031 CSF1R-2 CSF1R-2 sr-bi sr-bi ENSSSAP00000010301 ENSSSAP00000010301 LOC106601744 LOC106601744 ef1a1 ef1a1 LOC106607316 LOC106607316 LOC106564005 LOC106564005 LOC106570230 LOC106570230 LOC106560797 LOC106560797 CMKLR1 CMKLR1 LOC106592035 LOC106592035 LOC106607297 LOC106607297 LOC106596454 LOC106596454 FABPI FABPI ENSSSAP00000024887 ENSSSAP00000024887 LOC106588586 LOC106588586 tmod4 tmod4 rnf8 rnf8 jak1 jak1 herc4 herc4 TYK2 TYK2 tlr3 tlr3 LOC100136459 LOC100136459 DUSP6 DUSP6 LOC106587129 LOC106587129 LOC106606913 LOC106606913 LOC106610289 LOC106610289 jak3 jak3 rig-I rig-I LOC106585470 LOC106585470 ctsa ctsa LOC106584253 LOC106584253 LOC106595750 LOC106595750 CSF1R-3 CSF1R-3 PIK3R4 PIK3R4 LOC106567640 LOC106567640 IRF8 IRF8 LOC106608297 LOC106608297 cxcr3 cxcr3 CXCR3 CXCR3 LOC106587371 LOC106587371 LOC106613337 LOC106613337 STAT1 STAT1 LOC106564981 LOC106564981 optn optn LOC106600963 LOC106600963 LOC101448042 LOC101448042 LOC106604392 LOC106604392 LOC106561982 LOC106561982 LOC106561955 LOC106561955 LOC106566669 LOC106566669 rac1 rac1 irf1 irf1 fabp4 fabp4 fabp4-2 fabp4-2 cmklr1 cmklr1 LOC106612106 LOC106612106 CSF1R-4 CSF1R-4 ENSSSAP00000069818 ENSSSAP00000069818 sc5d sc5d LOC106607218 LOC106607218 lgmn lgmn LOC106605021 LOC106605021 LOC106566669-2 LOC106566669-2 LOC106560825 LOC106560825 LOC106560825-2 LOC106560825-2 STAT2 STAT2 LOC106564804 LOC106564804 LOC106584161 LOC106584161 LOC106589386 LOC106589386 rcc1 rcc1 LOC106607825 LOC106607825 batf3 batf3 LOC106580917 LOC106580917 LOC106580769 LOC106580769 atf3-2 atf3-2 LOC106571544 LOC106571544 casp9 casp9 LOC106567147 LOC106567147 LOC100136496 LOC100136496 eif2ak2 eif2ak2 IRF-7B IRF-7B cytip cytip CYTIP CYTIP irf7 irf7 LOC106610234 LOC106610234 LOC100136558 LOC100136558 tlr9 tlr9 LOC100534606 LOC100534606 LOC106586700 LOC106586700 LOC106563563 LOC106563563 LOC106576971 LOC106576971 tank tank CREM CREM ifih1 ifih1 LOC106586184 LOC106586184 BCL2 BCL2 LOC106561969 LOC106561969 LOC106578553 LOC106578553 csf1 csf1 LOC100286690 LOC100286690 LOC106565101 LOC106565101
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106572260Transmembrane protein 115-like. (367 aa)
LOC106601562Eukaryotic translation initiation factor 3 subunit D-like. (588 aa)
LOC106609976Ras-related C3 botulinum toxin substrate 1. (243 aa)
LOC100136352Actin-1. (410 aa)
LOC106590795Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
atf3Cyclic AMP-dependent transcription factor ATF-3. (198 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106585043TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (566 aa)
CSF1RMacrophage colony-stimulating factor 1 receptor 1-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (978 aa)
PLD4Phospholipase D4-like. (519 aa)
LOC106601025Signal transducer and activator of transcription. (802 aa)
LOC101448031Interleukin; Belongs to the IL-15/IL-21 family. (215 aa)
CSF1R-2Macrophage colony-stimulating factor 1 receptor 1-like isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1091 aa)
sr-biScavenger receptor class B type I isoform X1; Belongs to the CD36 family. (531 aa)
ENSSSAP00000010301Tubulin, gamma 1. (460 aa)
LOC106601744Ras-related C3 botulinum toxin substrate 1-like. (192 aa)
ef1a1Salmo salar Elongation factor 1-alpha 1 (ef1a1), mRNA. (475 aa)
LOC106607316Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (456 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
LOC106570230Nuclear transport factor 2-like. (128 aa)
LOC106560797Cathepsin L1-like; Belongs to the peptidase C1 family. (337 aa)
CMKLR1Chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (346 aa)
LOC106592035TNF receptor-associated factor 6-like. (367 aa)
LOC106607297Signal transducer and activator of transcription 3-like. (808 aa)
LOC106596454Interleukin; Belongs to the IL-15/IL-21 family. (177 aa)
FABPIFatty acid-binding protein, intestinal-like; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (188 aa)
ENSSSAP00000024887sterol-C5-desaturase. (280 aa)
LOC106588586Nuclear transport factor 2-like. (128 aa)
tmod4Tropomodulin-4 isoform X1. (374 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (538 aa)
jak1Tyrosine-protein kinase. (1162 aa)
herc4Probable E3 ubiquitin-protein ligase HERC4 isoform X1. (1050 aa)
TYK2Tyrosine-protein kinase. (1176 aa)
tlr3Toll-like receptor 3 isoform X1; Belongs to the Toll-like receptor family. (913 aa)
LOC100136459Caspase 8-like protein. (499 aa)
DUSP6Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (382 aa)
LOC106587129FAS-associated death domain protein-like. (221 aa)
LOC106606913Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (602 aa)
LOC106610289Probable E3 ubiquitin-protein ligase HERC3 isoform X2. (1036 aa)
jak3Tyrosine-protein kinase. (1113 aa)
rig-IRetinoic acid-inducible gene-I. (557 aa)
LOC106585470Phosphoinositide 3-kinase regulatory subunit 4-like. (1339 aa)
ctsaCarboxypeptidase; Belongs to the peptidase S10 family. (476 aa)
LOC106584253Cathepsin L1-like; Belongs to the peptidase C1 family. (355 aa)
LOC106595750Beta-1-syntrophin-like. (124 aa)
CSF1R-3Macrophage colony-stimulating factor 1 receptor 1-like isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (988 aa)
PIK3R4Phosphoinositide 3-kinase regulatory subunit 4-like. (1349 aa)
LOC106567640Histone H2A; Belongs to the histone H2A family. (128 aa)
IRF8Interferon regulatory factor 8-like isoform X3. (587 aa)
LOC106608297Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
cxcr3C-X-C chemokine receptor type 3-like; Belongs to the G-protein coupled receptor 1 family. (376 aa)
CXCR3C-X-C chemokine receptor type 3-like; Belongs to the G-protein coupled receptor 1 family. (377 aa)
LOC106587371Interferon regulatory factor 8-like isoform X1. (590 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
STAT1Signal transducer and activator of transcription 1. (754 aa)
LOC106564981Cathepsin L1-like; Belongs to the peptidase C1 family. (370 aa)
optnOptineurin. (571 aa)
LOC106600963Interferon a3-like isoform X1. (175 aa)
LOC101448042IFNb precursor. (183 aa)
LOC106604392Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
LOC106561982Cathepsin L1-like; Belongs to the peptidase C1 family. (341 aa)
LOC106561955Cathepsin L1-like; Belongs to the peptidase C1 family. (230 aa)
LOC10656666960S ribosomal protein L32. (138 aa)
rac1Ras-related C3 Botulinum toxin substrate 1. (192 aa)
irf1Interferon regulatory factor. (334 aa)
fabp4Salmo salar Fatty acid-binding protein, adipocyte (fabp4), mRNA. (195 aa)
fabp4-2Fatty acid-binding protein, adipocyte-like; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
cmklr1Chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (347 aa)
LOC106612106Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
CSF1R-4Macrophage colony stimulating factor receptor-like protein isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (970 aa)
ENSSSAP00000069818Cathepsin F. (471 aa)
sc5dLathosterol oxidase; Belongs to the sterol desaturase family. (328 aa)
LOC106607218Tyrosine-protein kinase. (1197 aa)
lgmnLegumain isoform X1. (435 aa)
LOC106605021Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106566669-260S ribosomal protein L32. (135 aa)
LOC106560825Nuclear transport factor 2. (137 aa)
LOC106560825-2Nuclear transport factor 2. (127 aa)
STAT2Signal transducer and activator of transcription. (811 aa)
LOC106564804TNF receptor-associated factor. (470 aa)
LOC106584161Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106589386Interferon-induced protein with tetratricopeptide repeats 5-like isoform X1. (545 aa)
rcc1Regulator of chromosome condensation isoform X1. (453 aa)
LOC106607825Cyclic AMP-dependent transcription factor ATF-3-like. (200 aa)
batf3Basic Leucine zipper transcriptional factor ATF-like 3. (109 aa)
LOC106580917Tropomodulin-4-like. (370 aa)
LOC106580769Interleukin; Belongs to the IL-15/IL-21 family. (153 aa)
atf3-2Cyclic AMP-dependent transcription factor ATF-3. (221 aa)
LOC106571544Basic leucine zipper transcriptional factor ATF-like 3. (129 aa)
casp9Caspase-9 isoform X1; Belongs to the peptidase C14A family. (450 aa)
LOC106567147Caspase-9-like; Belongs to the peptidase C14A family. (456 aa)
LOC100136496FIP2-like. (572 aa)
eif2ak2Interferon-induced, double-stranded RNA-activated protein kinase isoform X2. (730 aa)
IRF-7BInterferon regulatory factor 7B. (492 aa)
cytipPleckstrin homology Sec7 and coiled-coil domains-binding protein. (355 aa)
CYTIPCytohesin-interacting protein-like. (408 aa)
irf7Interferon regulatory factor 7. (415 aa)
LOC106610234Interleukin; Belongs to the IL-15/IL-21 family. (227 aa)
LOC100136558Signal transducer and activator of transcription. (773 aa)
tlr9Toll-like receptor 9 isoform X1; Belongs to the Toll-like receptor family. (1074 aa)
LOC100534606SCARB1-like protein 2 isoform X4; Belongs to the CD36 family. (518 aa)
LOC106586700Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC106576971Lathosterol oxidase-like; Belongs to the sterol desaturase family. (295 aa)
tankLOW QUALITY PROTEIN: TRAF family member-associated NF-kappa-B activator. (332 aa)
CREMcAMP-responsive element modulator-like isoform X4. (110 aa)
ifih1Interferon-induced helicase C domain-containing protein 1 isoform X1. (1002 aa)
LOC106586184TRAF family member-associated NF-kappa-B activator-like isoform X1. (361 aa)
BCL2Apoptosis regulator Bcl-2-like. (230 aa)
LOC106561969FAS-associated death domain protein-like. (195 aa)
LOC106578553Mitogen-activated protein kinase kinase kinase 8-like. (475 aa)
csf1Macrophage colony-stimulating factor 1. (591 aa)
LOC100286690Tyrosine-protein kinase. (1172 aa)
LOC106565101Uncharacterized protein LOC106565101. (565 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]