34 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106605021	Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
	LOC106563996	Suppressor of cytokine signaling 1-like. (324 aa)
	LOC106601025	Signal transducer and activator of transcription. (802 aa)
	LOC100136559	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	LOC106590795	Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
	LOC106584161	Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
	LOC106573710	Interleukin-34-like. (211 aa)
	nos2	Nitric oxide synthase; Produces nitric oxide (NO). (1162 aa)
	LOC106602581	Lectin-like. (246 aa)
	nod2	Nucleotide-binding oligomerization domain-containing protein 2 isoform X1. (1002 aa)
	LOC106607297	Signal transducer and activator of transcription 3-like. (808 aa)
	TAPBP	TAP binding protein. (442 aa)
	LOC106563563	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	LOC106604777	Toll-like receptor 6. (837 aa)
	ncf1	SH3 and PX domain-containing protein 2A. (413 aa)
	p67phox	NADPH oxidase cytosolic protein. (504 aa)
	argi1	Arginase. (341 aa)
	LOC106587384	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (188 aa)
	cp	Ceruloplasmin; Belongs to the multicopper oxidase family. (1122 aa)
	LOC106562391	LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 2-like. (852 aa)
	LOC106562274	Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (188 aa)
	LOC106608297	Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
	ARG1	Arginase. (338 aa)
	il34	Interleukin-34. (227 aa)
	LOC106613337	Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
	LOC106579390	Nucleotide-binding oligomerization domain-containing protein 1-like. (960 aa)
	LOC106604392	Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
	LOC100136479	CD83 antigen isoform X2. (229 aa)
	LOC106599427	Suppressor of cytokine signaling 1-like. (200 aa)
	LOC106612106	Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
	IL-10	Interleukin-10-like. (123 aa)
	LOC106605511	Nucleotide-binding oligomerization domain-containing protein 1-like. (954 aa)
	nos1	Nitric oxide synthase; Produces nitric oxide (NO). (1477 aa)
	LOC100136512	Interleukin-10. (300 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARG1	IL-10	ENSSSAP00000052854	ENSSSAP00000068333	Arginase.	Interleukin-10-like.	0.724
ARG1	LOC100136512	ENSSSAP00000052854	ENSSSAP00000080196	Arginase.	Interleukin-10.	0.724
ARG1	argi1	ENSSSAP00000052854	ENSSSAP00000029501	Arginase.	Arginase.	0.900
ARG1	nos1	ENSSSAP00000052854	ENSSSAP00000078737	Arginase.	Nitric oxide synthase; Produces nitric oxide (NO).	0.933
IL-10	ARG1	ENSSSAP00000068333	ENSSSAP00000052854	Interleukin-10-like.	Arginase.	0.724
IL-10	LOC100136479	ENSSSAP00000068333	ENSSSAP00000063006	Interleukin-10-like.	CD83 antigen isoform X2.	0.569
IL-10	LOC100136512	ENSSSAP00000068333	ENSSSAP00000080196	Interleukin-10-like.	Interleukin-10.	0.900
IL-10	LOC100136559	ENSSSAP00000068333	ENSSSAP00000004983	Interleukin-10-like.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.627
IL-10	LOC106562391	ENSSSAP00000068333	ENSSSAP00000040048	Interleukin-10-like.	LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 2-like.	0.416
IL-10	LOC106563563	ENSSSAP00000068333	ENSSSAP00000109831	Interleukin-10-like.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.627
IL-10	LOC106579390	ENSSSAP00000068333	ENSSSAP00000055834	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 1-like.	0.732
IL-10	LOC106599427	ENSSSAP00000068333	ENSSSAP00000019490	Interleukin-10-like.	Suppressor of cytokine signaling 1-like.	0.601
IL-10	LOC106601025	ENSSSAP00000068333	ENSSSAP00000007429	Interleukin-10-like.	Signal transducer and activator of transcription.	0.654
IL-10	LOC106604777	ENSSSAP00000068333	ENSSSAP00000113763	Interleukin-10-like.	Toll-like receptor 6.	0.741
IL-10	LOC106605511	ENSSSAP00000068333	ENSSSAP00000074582	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 1-like.	0.732
IL-10	LOC106607297	ENSSSAP00000068333	ENSSSAP00000021394	Interleukin-10-like.	Signal transducer and activator of transcription 3-like.	0.624
IL-10	LOC106613337	ENSSSAP00000068333	ENSSSAP00000053777	Interleukin-10-like.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.628
IL-10	argi1	ENSSSAP00000068333	ENSSSAP00000029501	Interleukin-10-like.	Arginase.	0.723
IL-10	nod2	ENSSSAP00000068333	ENSSSAP00000104635	Interleukin-10-like.	Nucleotide-binding oligomerization domain-containing protein 2 isoform X1.	0.416
IL-10	nos2	ENSSSAP00000068333	ENSSSAP00000098967	Interleukin-10-like.	Nitric oxide synthase; Produces nitric oxide (NO).	0.514