STRINGSTRING
lum lum LOC100136352 LOC100136352 LOC106608673 LOC106608673 LOC106572039 LOC106572039 LOC106564005 LOC106564005 LUM LUM LOC106566662 LOC106566662 LOC106566659 LOC106566659 LOC106609328 LOC106609328 LOC106589269 LOC106589269 bgn bgn nyx nyx LOC106583520 LOC106583520 LOC106579008 LOC106579008 mrf4 mrf4 LOC106565326 LOC106565326 cenpp cenpp LOC100136544 LOC100136544 Pgs2 Pgs2 LOC106609040 LOC106609040 LOC106609038 LOC106609038 LOC100136494 LOC100136494 tp53 tp53 LOC106566838 LOC106566838 dlx5 dlx5 atf4 atf4 LOC106560429 LOC106560429 LOC106579293 LOC106579293 LOC106606426 LOC106606426
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lumLumican isoform X1. (360 aa)
LOC100136352Actin-1. (410 aa)
LOC106608673Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (377 aa)
LOC106572039Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (377 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
LUMLumican-like isoform X1. (360 aa)
LOC106566662Sarcolemmal membrane-associated protein-like isoform X2. (397 aa)
LOC106566659Monoacylglycerol lipase ABHD6-like isoform X1. (350 aa)
LOC106609328Transcription factor SOX-5-like isoform X3. (793 aa)
LOC106589269Chondroadherin-like. (363 aa)
bgnBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (446 aa)
nyxNyctalopin. (481 aa)
LOC106583520Prolargin-like. (380 aa)
LOC106579008Transcription factor Sox-9-B-like isoform X2. (492 aa)
mrf4Myogenic regulatory factor 4. (235 aa)
LOC106565326Prolargin-like isoform X1. (455 aa)
cenppCentromere protein P. (235 aa)
LOC100136544Myogenic factor 6. (238 aa)
Pgs2Decorin. (218 aa)
LOC106609040Leucine-rich repeat protein soc-2 homolog. (679 aa)
LOC106609038Keratocan-like. (345 aa)
LOC100136494Decorin; May affect the rate of fibrils formation. (364 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (454 aa)
LOC106566838Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (371 aa)
dlx5Homeobox protein Dlx5a. (286 aa)
atf4Cyclic AMP-dependent transcription factor ATF-4. (427 aa)
LOC106560429Podocan-like. (604 aa)
LOC106579293Chondroadherin-like. (363 aa)
LOC106606426Transcription factor Sox-9-A-like isoform X1. (490 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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