22 items (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	myf5	Myogenic factor. (297 aa)
	LOC106576326	Myogenic factor. (239 aa)
	pxdn	Peroxidasin homolog isoform X1. (1489 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ENSSSAP00000019392	Proliferating cell nuclear antigen. (218 aa)
	MYOD1	Myogenic factor. (276 aa)
	Fbxo32	F-box protein 32 alpha. (231 aa)
	ENSSSAP00000028587	annotation not available (52 aa)
	myod1	Salmo salar myogenic differentiation 1 (myod1), mRNA. (276 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2569 aa)
	myod2	Myogenic factor. (276 aa)
	LOC106580445	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	pax7	Salmo salar paired box protein 7 (pax7), mRNA. (714 aa)
	LOC106572928	Peroxidasin-like. (1491 aa)
	rl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	alb1	Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. (658 aa)
	LOC106583049	Paired box protein Pax-7-like isoform X6. (501 aa)
	LOC106570911	Serum albumin 2-like. (608 aa)
	sod2	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (301 aa)
	LOC106587182	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	myog	Myogenin. (254 aa)
	myod1c	Myogenic factor. (272 aa)

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000019392	sod2	ENSSSAP00000019392	ENSSSAP00000100762	Proliferating cell nuclear antigen.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.597
ENSSSAP00000028587	LOC106587182	ENSSSAP00000028587	ENSSSAP00000105074	annotation not available	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.516
ENSSSAP00000028587	MYOD1	ENSSSAP00000028587	ENSSSAP00000020533	annotation not available	Myogenic factor.	0.488
ENSSSAP00000028587	mtor	ENSSSAP00000028587	ENSSSAP00000045512	annotation not available	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.477
ENSSSAP00000028587	myod1	ENSSSAP00000028587	ENSSSAP00000031238	annotation not available	Salmo salar myogenic differentiation 1 (myod1), mRNA.	0.516
ENSSSAP00000028587	myog	ENSSSAP00000028587	ENSSSAP00000108084	annotation not available	Myogenin.	0.631
ENSSSAP00000028587	rl13	ENSSSAP00000028587	ENSSSAP00000092481	annotation not available	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.516
Fbxo32	LOC106576326	ENSSSAP00000025886	ENSSSAP00000012184	F-box protein 32 alpha.	Myogenic factor.	0.430
Fbxo32	LOC106587182	ENSSSAP00000025886	ENSSSAP00000105074	F-box protein 32 alpha.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.490
Fbxo32	MYOD1	ENSSSAP00000025886	ENSSSAP00000020533	F-box protein 32 alpha.	Myogenic factor.	0.469
Fbxo32	mtor	ENSSSAP00000025886	ENSSSAP00000045512	F-box protein 32 alpha.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.481
Fbxo32	myf5	ENSSSAP00000025886	ENSSSAP00000067064	F-box protein 32 alpha.	Myogenic factor.	0.430
Fbxo32	myod1	ENSSSAP00000025886	ENSSSAP00000031238	F-box protein 32 alpha.	Salmo salar myogenic differentiation 1 (myod1), mRNA.	0.487
Fbxo32	myog	ENSSSAP00000025886	ENSSSAP00000108084	F-box protein 32 alpha.	Myogenin.	0.634
Fbxo32	rl13	ENSSSAP00000025886	ENSSSAP00000092481	F-box protein 32 alpha.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.490
LOC106570911	LOC106572928	ENSSSAP00000099721	ENSSSAP00000091330	Serum albumin 2-like.	Peroxidasin-like.	0.755
LOC106570911	pxdn	ENSSSAP00000099721	ENSSSAP00000016083	Serum albumin 2-like.	Peroxidasin homolog isoform X1.	0.755
LOC106572928	LOC106570911	ENSSSAP00000091330	ENSSSAP00000099721	Peroxidasin-like.	Serum albumin 2-like.	0.755
LOC106572928	alb1	ENSSSAP00000091330	ENSSSAP00000093436	Peroxidasin-like.	Serum albumin 1; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood.	0.756
LOC106572928	myog	ENSSSAP00000091330	ENSSSAP00000108084	Peroxidasin-like.	Myogenin.	0.436