STRINGSTRING
rig-I rig-I LOC106599713 LOC106599713 LOC106608297 LOC106608297 LOC106613337 LOC106613337 ifih1 ifih1 LOC106563563 LOC106563563 LOC100136558 LOC100136558 irf7 irf7 LOC106604392 LOC106604392 LOC106566344 LOC106566344 LOC106612106 LOC106612106 LOC106605021 LOC106605021 LOC106574396 LOC106574396 LOC106584161 LOC106584161 LOC100136453 LOC100136453 eif2ak2 eif2ak2 LOC100136352 LOC100136352 LOC106590795 LOC106590795 LOC100136559 LOC100136559 LOC106564005 LOC106564005 rl4a rl4a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rig-IRetinoic acid-inducible gene-I. (557 aa)
LOC106599713Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (456 aa)
LOC106608297Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
LOC106613337Transforming growth factor beta; Belongs to the TGF-beta family. (384 aa)
ifih1Interferon-induced helicase C domain-containing protein 1 isoform X1. (1002 aa)
LOC106563563Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
LOC100136558Signal transducer and activator of transcription. (773 aa)
irf7Interferon regulatory factor 7. (415 aa)
LOC106604392Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
LOC106566344Interleukin-1 receptor-associated kinase 1-like isoform X1. (752 aa)
LOC106612106Transforming growth factor beta; Belongs to the TGF-beta family. (425 aa)
LOC106605021Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC106574396Toll-like receptor 13. (931 aa)
LOC106584161Transforming growth factor beta; Belongs to the TGF-beta family. (411 aa)
LOC100136453Cathelicidin isoform X1. (207 aa)
eif2ak2Interferon-induced, double-stranded RNA-activated protein kinase isoform X2. (730 aa)
LOC100136352Actin-1. (410 aa)
LOC106590795Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC100136559Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC106564005Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
rl4a60S ribosomal protein L4-A. (392 aa)
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.